dhrs12 (dhrs12,LOC107685263,LOC107723690,LOC106511784)


Basic Information

Item Value
gene id dhrs12
gene name dhrs12,LOC107685263,LOC107723690,LOC106511784
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 1306954 ~ 1315333 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026911029.2
GGAAGTTGACCAGCGCGACTGTTTGTGTAACAGCAGCGTTTCCTTTCCAGCTGAGCTAATTTTCAACTCATGCGTTGCTGTAGATAGGGCTAGTCTTTGAGCTGTAGATCTACACCACGTGCTGTGTGTTATGGTCATGCTTATGAAACGGTAGATAaggcgcgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttatatcaGTTATATCAGAAGGCAGCAGCATGTCTTTTTACAGAAACGCGGTTTGGTTTGTGAAAGGTCTGCAGGAATACACCAGGAGCGGCTATGAAGCGGCTGCAAAACATTTCGTAGCTTCCGATCTGGAGGTCGATGTAAGCGGCAGGTCTTTTATCATCACAGGCGCCAACAGCGGGATCGGGAAAGCAACCGCTGTGGAAATAGCTAAACGAGGTGGTACGGTGCACATGGTGTGTCGGAATAAAGATCGCGCGGACGAGGCCAGGACACACATTGTGGAGCAGAGCAAAAATGAGAACGTGCACGTGCACATTGTGGACATGTCGAGCCCCAGAGGATTGTGGGAGTTTGCCAACTCGTTCACTCAGAACCACAGCGTGCACGTgctgATCAACAATGCTGGGTGTATGGTGAATCAGCGAGAGTTGACCGAGGATGGCTTGGAGAAAAACTTTGCCACCAACACActtgGAACGTTCATCCTGACCACAGCGCTGATTCCTGTGCTGAAAAAGTCCCAGGACCCAAGAGTGATCACGGTATCGTCAGGAGGAATGCTGGTTCAGAAACTCAACCTTGATGATCTGCAGTTTGAAAAAGGCACTTTCGATGGAACCATGGCTTACGCACAGaacaagAGACAGCAAGTGATAATGACAGAAGTTTGGGCGCGTCAGCACAAAGAGATTCATTTCTCATCCATGCACCCGGGCTGGGCCGACACaccagCGGTGCAGTCGTCCATGCCGGATTTTCACGccaaaatgaagaacaaattACGCACAGAAGCACAAGGAGCCGACACCGTGGCGTGGTTAGCTGTGGCTGACGCGGCCGCGAAACATCCCAGCGGCCTCTTCTTCCAAGACAGAACACCAGTGTCCACACACCTGCCTCTGGCCTTCACCAGATCCTCTGCCTCTGAGGAGGACGAGCTGATGAACAGGCTGGAGCAACTCAGCGCACAGTTCAAGCCGCGTCTTACTTCAGGACTCTAACCAAAGAACGAACTCGTCCAGATGCAAAACCTGAGTCTGTGTTTGTATGAGCAGTAATCAGAAATATGGAGGTATGGAATGTGCCATCACAAAGCTGTAATGCTTCCTGGCCCATTTCTCAAACACTTAATTCTCACTTAATTCTACTCGGATTTATTTTCCTGTTCAGCACACTGACTTACAGCCTTTATTAACCATAAAACTTACTCCATGTCAAACTTACAATCTAATATGAAGTTGTTTACATTTCGAGTTATTGAGTTTAttgtgaaaattaatcaaacatatattaaagtatatctgaaaatatatacattaaaatcaTGTGCTGTTGAAGTAcgtaacagatttttttctttttt
>XM_034304700.1
TCCGGAAGTTGACCAGCGCGACTGTTTGTGTAACAGCAGCGTTTCCTTTCCAGCTGAGCTAATTTTCAACTCATGCGTTGCTGTAGATAGGGCTAGTCTTTGAGCTGTAGATCTACACCACGTGCTGTGTGTTATGGTCATGCTTATGAAACGGTAGATAaggcgcgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttatatcaGTTATATCAGAAGGCAGCAGCATGTCTTTTTACAGAAACGCGGTTTGGTTTGTGAAAGGTCTGCAGGAATACACCAGGAGCGGCTATGAAGCGGCTGCAAAACATTTCGTAGCTTCCGATCTGGAGGTCGATGTAAGCGGCAGGTCTTTTATCATCACAGGCGCCAACAGCGGGATCGGGAAAGCAACCGCTGTGGAAATAGCTAAACGAGGTGGTACGGTGCACATGGTGTGTCGGAATAAAGATCGCGCGGACGAGGCCAGGACACACATTGTGGAGCAGAGCAAAAATGAGAACGTGCACGTGCACATTGTGGACATGTCGAGCCCCAGAGGATTGTGGGAGTTTGCCAACTCGTTCACTCAGAACCACAGCGTGCACGTgctgATCAACAATGCTGGGTGTATGGTGAATCAGCGAGAGTTGACCGAGGATGGCTTGGAGAAAAACTTTGCCACCAACACActtggtcTTGCCACAGGAACGTTCATCCTGACCACAGCGCTGATTCCTGTGCTGAAAAAGTCCCAGGACCCAAGAGTGATCACGGTATCGTCAGGAGGAATGCTGGTTCAGAAACTCAACCTTGATGATCTGCAGTTTGAAAAAGGCACTTTCGATGGAACCATGGCTTACGCACAGaacaagAGACAGCAAGTGATAATGACAGAAGTTTGGGCGCGTCAGCACAAAGAGATTCATTTCTCATCCATGCACCCGGGCTGGGCCGACACaccagCGGTGCAGTCGTCCATGCCGGATTTTCACGccaaaatgaagaacaaattACGCACAGAAGCACAAGGAGCCGACACCGTGGCGTGGTTAGCTGTGGCTGACGCGGCCGCGAAACATCCCAGCGGCCTCTTCTTCCAAGACAGAACACCAGTGTCCACACACCTGCCTCTGGCCTTCACCAGATCCTCTGCCTCTGAGGAGGACGAGCTGATGAACAGGCTGGAGCAACTCAGCGCACAGTTCAAGCCGCGTCTTACTTCAGGACTCTAACCAAAGAACGAACTCGTCCAGATGCAAAACCTGAGTCTGTGTTTGTATGAGCAGTAATCAGAAATATGGAGGTATGGAATGTGCCATCACAAAGCTGTAATGCTTCCTGGCCCATTTCTCAAACACTTAATTCTCACTTAATTCTACTCGGATTTATTTTCCTGTTCAGCACACTGACTTACAGCCTTTATTAACCATAAAACTTACTCCATGTCAAACTTACAATCTAATATGAAGTTGTTTACATTTCGAGTTATTGAGTTTAttgtgaaaattaatcaaacatatattaaagtatatctgaaaatatatacattaaaatcaTGTGCTGTTGAAGTAcgtaacagatttttttcttttttc

Function

symbol description
dhrs12 Orthologous to human DHRS12 (dehydrogenase/reductase 12).

NR:

description
dehydrogenase/reductase SDR family member 12-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K11168 DHRS12; dehydrogenase/reductase SDR family member 12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026911029.2 False 1574 mRNA 0.47 10 1306955 1315330
XM_034304700.1 True 1590 mRNA 0.47 10 1306954 1315333

Neighbor

gene id symbol gene type direction distance location
trnan-guu_16 NA coding downstream 11184 1295696 ~ 1295770 (-)
trnat-agu_2 NA coding downstream 13010 1293871 ~ 1293944 (-)
trnan-guu_15 NA coding downstream 15294 1291586 ~ 1291660 (-)
trnat-agu_1 NA coding downstream 17154 1289727 ~ 1289800 (-)
trnan-guu_14 NA coding downstream 19827 1287053 ~ 1287127 (-)
rubcnl rubcnl coding upstream 4930 1320263 ~ 1339222 (-)
esd esd,LOC107675365,LOC107601075,LOC107709410 coding upstream 81351 1396684 ~ 1404791 (-)
trnaw-cca_4 NA coding upstream 99335 1414668 ~ 1414739 (-)
si:dkey-230p4.1 LOC108271988 coding upstream 214492 1529825 ~ 1552435 (-)
LOC113524666 LOC108271633 coding upstream 239609 1554942 ~ 1566787 (-)
G75687 NA non-coding downstream 601 1305989 ~ 1306353 (-)
G75663 NA non-coding downstream 52858 1237221 ~ 1254096 (-)
G75636 NA non-coding downstream 91250 1209385 ~ 1215704 (-)
G75640 NA non-coding downstream 137261 1169459 ~ 1169693 (-)
G75628 NA non-coding downstream 166751 1135626 ~ 1140203 (-)
G75713 NA non-coding upstream 51049 1366382 ~ 1367066 (-)
G75719 NA non-coding upstream 60053 1375386 ~ 1377189 (-)
G75727 NA non-coding upstream 69525 1384858 ~ 1385522 (-)
G75732 NA non-coding upstream 77446 1392779 ~ 1395138 (-)
G75734 NA non-coding upstream 80964 1396297 ~ 1396522 (-)
lcp1 lcp1,LOC108439517,LOC107740717,LOC107660271,LOC107732195 other downstream 119455 1170709 ~ 1187499 (-)
rpl31 rpl31,LOC102795706,LOC106575914,LOC107740715 other downstream 147616 1145297 ~ 1159338 (-)
LOC113524372 NA other downstream 368751 938012 ~ 938203 (-)
LOC113524338 LOC108266882,LOC108266876,LOC108266218,LOC108258194 other downstream 369986 919896 ~ 936968 (-)
sox21b LOC108266914,LOC108440504,LOC107722114,LOC107674003,LOC107558380 other downstream 442347 858404 ~ 864607 (-)
trnat-agu_4 NA other upstream 132858 1448191 ~ 1448264 (-)
trnak-uuu_2 NA other upstream 156156 1471489 ~ 1471561 (-)
G75770 NA other upstream 213737 1529070 ~ 1529513 (-)
htr2aa NA other upstream 276622 1591955 ~ 1596479 (-)
trnat-agu_6 NA other upstream 323052 1638385 ~ 1638458 (-)

Expression


Co-expression Network