c5h2orf69 (c6h2orf69)


Basic Information

Item Value
gene id c5h2orf69
gene name c6h2orf69
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 2919306 ~ 2920007 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026937158.2
ATGGCTCTGCAGCCTGATGCCTCTCCATGGCTCTCATTCAGTCTGGAGCGAGTAGCTTTGGTGCTAGGTGCCCGCTTCCCAGGCCGCCATGTGTGGCTGGTGCGTCCATCACGGCTCCACCTGCACAAGTTCAGCTGCTATTCCAACTTTGTTTCATGTGACCTGTTTGGCGCACCTAAGCACTCGCCTGACTACGGCGCCGTGCGCCACTTACGAGCCCTCCTGGGCAACGCCATGAAGCGTGCAGCTATCGCCGAGCCTTTGCCACCACTAGTAGGTGCCTCAGTGCCTGCTCCCCTCCCTACAGGCTTCTCGCTTATTTTAGTGGGCTTCAGTAAAGGCTGCGTGGTGCTGAATCAGATGGTACACGAGCTGGCATCAGCCCGCACTGACCCAGAGCTGAGGCAGTTTCTGGACAGCACCTCGGACATGTACTGGCTGGACGGTGGACACCCAGGCACCGGAGACACGTGGGTGACGGATAAGCAGGTGTTGGGTGAGTTGGCATCCAGCGGAGTGGCCGTGCACGCTCACGTCACTCCCTATGAAGTGTGCGACCCAGCGAGGGCGTGGGTGGGACGCGAGCATCGGTGCTTCGTAAAGACGCTGAAAGAACTTGGTGCCCGCATCTCACAAAACCTCCACTTTGAGGACGAGCCAGCATGCATCGGAAACCACTTCCGGGTCATCGAGGAGTTCTGA

Function

NR:

description
PREDICTED: UPF0565 protein C2orf69 homolog

GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026937158.2 True 702 mRNA 0.59 1 2919306 2920007

Neighbor

gene id symbol gene type direction distance location
tyw5 tyw5,LOC107725219,LOC107728297 coding downstream 89485 2823816 ~ 2829821 (-)
crfb1 NA coding downstream 120304 2775840 ~ 2799002 (-)
LOC113540598 NA coding downstream 146917 2760250 ~ 2772389 (-)
LOC113541336 LOC108266841 coding downstream 159100 2745336 ~ 2760206 (-)
crfb4 LOC108266840 coding downstream 176086 2734184 ~ 2743220 (-)
nabp1a nabp1,nabp2,LOC107718374,LOC106575791,LOC108255000 coding upstream 8814 2928821 ~ 2953801 (-)
trnas-cga NA coding upstream 19314 2939321 ~ 2939402 (-)
cavin2a sdpr coding upstream 24267 2944274 ~ 2960366 (-)
tmeff2a tmeff2,tmeff2a,LOC107670719,LOC107728299 coding upstream 48673 2968680 ~ 3060237 (-)
dnah7 dnah7 coding upstream 713985 3633992 ~ 3745382 (-)
G76400 stk17b non-coding downstream 2259 2914400 ~ 2917047 (-)
LOC117597440 NA non-coding downstream 22102 2893376 ~ 2897204 (-)
G76325 mink1,LOC108427066 non-coding downstream 360154 2556506 ~ 2559152 (-)
G76333 NA non-coding downstream 388314 2530654 ~ 2530992 (-)
G76093 NA non-coding downstream 468357 2449719 ~ 2450949 (-)
G76455 NA non-coding upstream 16074 2936081 ~ 2936563 (-)
G76462 NA non-coding upstream 45259 2965266 ~ 2966533 (-)
G76570 NA non-coding upstream 672811 3592818 ~ 3595411 (-)
G76658 NA non-coding upstream 931389 3851396 ~ 3852207 (-)
G76682 NA non-coding upstream 1017787 3937794 ~ 3938000 (-)
LOC113541352 c6h21orf62 other downstream 113443 2801006 ~ 2805863 (-)
ifngr2 NA other downstream 165500 2684508 ~ 2753806 (-)
LOC113547075 slc5a7,LOC108440498,LOC106586545,LOC106582186,LOC107733037 other downstream 855008 2047779 ~ 2064298 (-)
G75893 col6a3,LOC108262369,LOC106600155 other downstream 1115661 1797982 ~ 1803645 (-)
trnar-ucu_7 NA other downstream 1244733 1674484 ~ 1674573 (-)
faima faima,LOC108266416,LOC108425966,LOC102793570,LOC107723686,LOC107567769,LOC101481285 other upstream 866949 3786956 ~ 3816059 (-)
G77283 NA other upstream 1919953 4839960 ~ 4844879 (-)
LOC113534947 NA other upstream 2411577 5331584 ~ 5339633 (-)
LOC117597406 LOC108266244 other upstream 3318948 6238955 ~ 6253346 (-)
LOC117597343 NA other upstream 3403036 6323043 ~ 6324680 (-)

Expression


Co-expression Network