LOC113524372


Basic Information

Item Value
gene id LOC113524372
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 938012 ~ 938203 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_003402538.2
ATATTTGTTTGTAAGGGTGTGttggtttaattaaaaaaaattgttcttatcagtttaataaCTGATACGTCCTCCATTTGAGGACTTtatattaaatggatttttagagCAGTGAGCTGGAAGAGGGGCTTGCTCCATCCGCTCCACGCATCGACCTGGTATTGCAGTATGTACATGAAAGGTGCACccttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_003402538.2 True 192 ncRNA 0.39 1 938012 938203

Neighbor

gene id symbol gene type direction distance location
dct dct coding downstream 104120 827281 ~ 833892 (-)
tlr7 tlr7,LOC108266215 coding downstream 208964 725511 ~ 729048 (-)
LOC113524316 LOC108272333 coding downstream 213600 720627 ~ 724412 (-)
arsh LOC108266883 coding downstream 252534 675519 ~ 685478 (-)
fancb fancb coding downstream 436805 490480 ~ 501207 (-)
LOC113524324 LOC108266872,LOC108260750 coding upstream 6116 944319 ~ 957738 (-)
LOC113524329 NA coding upstream 164837 1103040 ~ 1112551 (-)
trnas-uga_4 NA coding upstream 292106 1230309 ~ 1230390 (-)
trnal-cag_10 NA coding upstream 292384 1230587 ~ 1230669 (-)
trnaw-cca NA coding upstream 314720 1252923 ~ 1252994 (-)
G75428 NA non-coding downstream 8655 929147 ~ 929357 (-)
G75429 NA non-coding downstream 9046 927859 ~ 928966 (-)
G75348 NA non-coding downstream 45955 796822 ~ 892057 (-)
G75372 NA non-coding downstream 165582 767361 ~ 772430 (-)
G75369 NA non-coding downstream 173457 764295 ~ 764555 (-)
G75599 NA non-coding upstream 141720 1079923 ~ 1080355 (-)
G75600 NA non-coding upstream 143004 1081207 ~ 1081406 (-)
G75628 NA non-coding upstream 197423 1135626 ~ 1140203 (-)
G75640 NA non-coding upstream 231256 1169459 ~ 1169693 (-)
G75636 NA non-coding upstream 271182 1209385 ~ 1215704 (-)
LOC113524338 LOC108266882,LOC108266876,LOC108266218,LOC108258194 other downstream 1044 919896 ~ 936968 (-)
sox21b LOC108266914,LOC108440504,LOC107722114,LOC107674003,LOC107558380 other downstream 73405 858404 ~ 864607 (-)
frmpd4 frmpd4 other downstream 172021 729592 ~ 765991 (-)
tmsb4x NA other downstream 218897 691080 ~ 719115 (-)
LOC113524348 LOC108266920 other downstream 563368 372567 ~ 374644 (-)
rpl31 rpl31,LOC102795706,LOC106575914,LOC107740715 other upstream 207094 1145297 ~ 1159338 (-)
lcp1 lcp1,LOC108439517,LOC107740717,LOC107660271,LOC107732195 other upstream 232506 1170709 ~ 1187499 (-)
trnat-agu_4 NA other upstream 509988 1448191 ~ 1448264 (-)
trnak-uuu_2 NA other upstream 533286 1471489 ~ 1471561 (-)
G75770 NA other upstream 590867 1529070 ~ 1529513 (-)

Expression


Co-expression Network