trnak-uuu_2


Basic Information

Item Value
gene id trnak-uuu_2
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 1471489 ~ 1471561 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnak-uuu_2
GCCCGGATAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCCAGGGTTCAAGTCCCTGTTCGGGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnak-uuu_2 True 73 tRNA 0.56 1 1471489 1471561

Neighbor

gene id symbol gene type direction distance location
trnaw-cca_4 NA coding downstream 56750 1414668 ~ 1414739 (-)
esd esd,LOC107675365,LOC107601075,LOC107709410 coding downstream 66698 1396684 ~ 1404791 (-)
rubcnl rubcnl coding downstream 132267 1320263 ~ 1339222 (-)
dhrs12 dhrs12,LOC107685263,LOC107723690,LOC106511784 coding downstream 156156 1306954 ~ 1315333 (-)
si:dkey-230p4.1 LOC108271988 coding upstream 58264 1529825 ~ 1552435 (-)
LOC113524666 LOC108271633 coding upstream 83381 1554942 ~ 1566787 (-)
trnal-caa_7 NA coding upstream 97184 1568745 ~ 1568857 (-)
med4 med4,LOC107673119,LOC107709409,LOC107724027 coding upstream 144339 1615900 ~ 1624049 (-)
mlphb LOC108261129 coding upstream 251696 1723257 ~ 1747031 (-)
G75740 NA non-coding downstream 3590 1467662 ~ 1467899 (-)
G75739 NA non-coding downstream 16202 1454999 ~ 1455287 (-)
G75737 NA non-coding downstream 38262 1433022 ~ 1433227 (-)
G75736 NA non-coding downstream 57312 1413842 ~ 1414177 (-)
G75734 NA non-coding downstream 74967 1396297 ~ 1396522 (-)
G75814 NA non-coding upstream 184812 1656373 ~ 1656848 (-)
G75875 NA non-coding upstream 251020 1722581 ~ 1722799 (-)
G75889 col6a3,LOC108262369 non-coding upstream 329711 1801272 ~ 1819183 (-)
G75880 NA non-coding upstream 377676 1849237 ~ 1873669 (-)
G75925 NA non-coding upstream 439635 1911196 ~ 1917438 (-)
trnat-agu_4 NA other downstream 23225 1448191 ~ 1448264 (-)
lcp1 lcp1,LOC108439517,LOC107740717,LOC107660271,LOC107732195 other downstream 283990 1170709 ~ 1187499 (-)
rpl31 rpl31,LOC102795706,LOC106575914,LOC107740715 other downstream 312151 1145297 ~ 1159338 (-)
LOC113524372 NA other downstream 533286 938012 ~ 938203 (-)
LOC113524338 LOC108266882,LOC108266876,LOC108266218,LOC108258194 other downstream 534521 919896 ~ 936968 (-)
G75770 NA other upstream 57509 1529070 ~ 1529513 (-)
htr2aa NA other upstream 120394 1591955 ~ 1596479 (-)
trnat-agu_6 NA other upstream 166824 1638385 ~ 1638458 (-)
trnar-ucu_5 NA other upstream 167202 1638763 ~ 1638852 (-)
trnat-agu_7 NA other upstream 178492 1650053 ~ 1650126 (-)

Expression


Co-expression Network