trnan-guu_15


Basic Information

Item Value
gene id trnan-guu_15
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 1291586 ~ 1291660 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnan-guu_15
GTCTCTGTGGCGCAATCTGGTTAGCGCGTTCGGCTGTTAACCGGAAGGTTGGTGGTTCGAGCCCACCCAGGGACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnan-guu_15 True 75 tRNA 0.61 1 1291586 1291660

Neighbor

gene id symbol gene type direction distance location
trnat-agu_1 NA coding downstream 1786 1289727 ~ 1289800 (-)
trnan-guu_14 NA coding downstream 4459 1287053 ~ 1287127 (-)
ints6 ints6,LOC107567782,LOC107695579,LOC107725253,LOC107685346 coding downstream 9584 1271407 ~ 1282002 (-)
trnal-caa_1 NA coding downstream 33330 1258142 ~ 1258256 (-)
trnaw-cca NA coding downstream 38592 1252923 ~ 1252994 (-)
trnat-agu_2 NA coding upstream 2211 1293871 ~ 1293944 (-)
trnan-guu_16 NA coding upstream 4036 1295696 ~ 1295770 (-)
dhrs12 dhrs12,LOC107685263,LOC107723690,LOC106511784 coding upstream 15294 1306954 ~ 1315333 (-)
trnal-caa_2 NA coding upstream 22654 1314314 ~ 1314426 (-)
rubcnl rubcnl coding upstream 28603 1320263 ~ 1339222 (-)
G75663 NA non-coding downstream 37490 1237221 ~ 1254096 (-)
G75636 NA non-coding downstream 75882 1209385 ~ 1215704 (-)
G75640 NA non-coding downstream 121893 1169459 ~ 1169693 (-)
G75628 NA non-coding downstream 151383 1135626 ~ 1140203 (-)
G75600 NA non-coding downstream 210180 1081207 ~ 1081406 (-)
G75687 NA non-coding upstream 14329 1305989 ~ 1306353 (-)
G75713 NA non-coding upstream 74722 1366382 ~ 1367066 (-)
G75719 NA non-coding upstream 83726 1375386 ~ 1377189 (-)
G75727 NA non-coding upstream 93198 1384858 ~ 1385522 (-)
G75732 NA non-coding upstream 101119 1392779 ~ 1395138 (-)
lcp1 lcp1,LOC108439517,LOC107740717,LOC107660271,LOC107732195 other downstream 104087 1170709 ~ 1187499 (-)
rpl31 rpl31,LOC102795706,LOC106575914,LOC107740715 other downstream 132248 1145297 ~ 1159338 (-)
LOC113524372 NA other downstream 353383 938012 ~ 938203 (-)
LOC113524338 LOC108266882,LOC108266876,LOC108266218,LOC108258194 other downstream 354618 919896 ~ 936968 (-)
sox21b LOC108266914,LOC108440504,LOC107722114,LOC107674003,LOC107558380 other downstream 426979 858404 ~ 864607 (-)
trnat-agu_4 NA other upstream 156531 1448191 ~ 1448264 (-)
trnak-uuu_2 NA other upstream 179829 1471489 ~ 1471561 (-)
G75770 NA other upstream 237410 1529070 ~ 1529513 (-)
htr2aa NA other upstream 300295 1591955 ~ 1596479 (-)
trnat-agu_6 NA other upstream 346725 1638385 ~ 1638458 (-)

Expression


Co-expression Network