trnan-guu_16


Basic Information

Item Value
gene id trnan-guu_16
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 1295696 ~ 1295770 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnan-guu_16
GTCTCTGTGGCGCAATCCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTGGTGGTTCGAGCCCACCCAGGGACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnan-guu_16 True 75 tRNA 0.61 1 1295696 1295770

Neighbor

gene id symbol gene type direction distance location
trnat-agu_2 NA coding downstream 1752 1293871 ~ 1293944 (-)
trnan-guu_15 NA coding downstream 4036 1291586 ~ 1291660 (-)
trnat-agu_1 NA coding downstream 5896 1289727 ~ 1289800 (-)
trnan-guu_14 NA coding downstream 8569 1287053 ~ 1287127 (-)
ints6 ints6,LOC107567782,LOC107695579,LOC107725253,LOC107685346 coding downstream 13694 1271407 ~ 1282002 (-)
dhrs12 dhrs12,LOC107685263,LOC107723690,LOC106511784 coding upstream 11184 1306954 ~ 1315333 (-)
trnal-caa_2 NA coding upstream 18544 1314314 ~ 1314426 (-)
rubcnl rubcnl coding upstream 24493 1320263 ~ 1339222 (-)
esd esd,LOC107675365,LOC107601075,LOC107709410 coding upstream 100914 1396684 ~ 1404791 (-)
trnaw-cca_4 NA coding upstream 118898 1414668 ~ 1414739 (-)
G75663 NA non-coding downstream 41600 1237221 ~ 1254096 (-)
G75636 NA non-coding downstream 79992 1209385 ~ 1215704 (-)
G75640 NA non-coding downstream 126003 1169459 ~ 1169693 (-)
G75628 NA non-coding downstream 155493 1135626 ~ 1140203 (-)
G75600 NA non-coding downstream 214290 1081207 ~ 1081406 (-)
G75687 NA non-coding upstream 10219 1305989 ~ 1306353 (-)
G75713 NA non-coding upstream 70612 1366382 ~ 1367066 (-)
G75719 NA non-coding upstream 79616 1375386 ~ 1377189 (-)
G75727 NA non-coding upstream 89088 1384858 ~ 1385522 (-)
G75732 NA non-coding upstream 97009 1392779 ~ 1395138 (-)
lcp1 lcp1,LOC108439517,LOC107740717,LOC107660271,LOC107732195 other downstream 108197 1170709 ~ 1187499 (-)
rpl31 rpl31,LOC102795706,LOC106575914,LOC107740715 other downstream 136358 1145297 ~ 1159338 (-)
LOC113524372 NA other downstream 357493 938012 ~ 938203 (-)
LOC113524338 LOC108266882,LOC108266876,LOC108266218,LOC108258194 other downstream 358728 919896 ~ 936968 (-)
sox21b LOC108266914,LOC108440504,LOC107722114,LOC107674003,LOC107558380 other downstream 431089 858404 ~ 864607 (-)
trnat-agu_4 NA other upstream 152421 1448191 ~ 1448264 (-)
trnak-uuu_2 NA other upstream 175719 1471489 ~ 1471561 (-)
G75770 NA other upstream 233300 1529070 ~ 1529513 (-)
htr2aa NA other upstream 296185 1591955 ~ 1596479 (-)
trnat-agu_6 NA other upstream 342615 1638385 ~ 1638458 (-)

Expression


Co-expression Network