trnat-agu_4


Basic Information

Item Value
gene id trnat-agu_4
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 1448191 ~ 1448264 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnat-agu_4
GGCGCTGTGGCTTAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAGatcctgggttcgattcccagcagTGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-agu_4 True 74 tRNA 0.54 1 1448191 1448264

Neighbor

gene id symbol gene type direction distance location
trnaw-cca_4 NA coding downstream 33452 1414668 ~ 1414739 (-)
esd esd,LOC107675365,LOC107601075,LOC107709410 coding downstream 43400 1396684 ~ 1404791 (-)
rubcnl rubcnl coding downstream 108969 1320263 ~ 1339222 (-)
dhrs12 dhrs12,LOC107685263,LOC107723690,LOC106511784 coding downstream 132858 1306954 ~ 1315333 (-)
trnal-caa_2 NA coding downstream 133765 1314314 ~ 1314426 (-)
si:dkey-230p4.1 LOC108271988 coding upstream 81561 1529825 ~ 1552435 (-)
LOC113524666 LOC108271633 coding upstream 106678 1554942 ~ 1566787 (-)
trnal-caa_7 NA coding upstream 120481 1568745 ~ 1568857 (-)
med4 med4,LOC107673119,LOC107709409,LOC107724027 coding upstream 167636 1615900 ~ 1624049 (-)
mlphb LOC108261129 coding upstream 274993 1723257 ~ 1747031 (-)
G75737 NA non-coding downstream 14964 1433022 ~ 1433227 (-)
G75736 NA non-coding downstream 34014 1413842 ~ 1414177 (-)
G75734 NA non-coding downstream 51669 1396297 ~ 1396522 (-)
G75732 NA non-coding downstream 53053 1392779 ~ 1395138 (-)
G75727 NA non-coding downstream 62669 1384858 ~ 1385522 (-)
G75739 NA non-coding upstream 6735 1454999 ~ 1455287 (-)
G75740 NA non-coding upstream 19398 1467662 ~ 1467899 (-)
G75814 NA non-coding upstream 208109 1656373 ~ 1656848 (-)
G75875 NA non-coding upstream 274317 1722581 ~ 1722799 (-)
G75889 col6a3,LOC108262369 non-coding upstream 353008 1801272 ~ 1819183 (-)
lcp1 lcp1,LOC108439517,LOC107740717,LOC107660271,LOC107732195 other downstream 260692 1170709 ~ 1187499 (-)
rpl31 rpl31,LOC102795706,LOC106575914,LOC107740715 other downstream 288853 1145297 ~ 1159338 (-)
LOC113524372 NA other downstream 509988 938012 ~ 938203 (-)
LOC113524338 LOC108266882,LOC108266876,LOC108266218,LOC108258194 other downstream 511223 919896 ~ 936968 (-)
sox21b LOC108266914,LOC108440504,LOC107722114,LOC107674003,LOC107558380 other downstream 583584 858404 ~ 864607 (-)
trnak-uuu_2 NA other upstream 23225 1471489 ~ 1471561 (-)
G75770 NA other upstream 80806 1529070 ~ 1529513 (-)
htr2aa NA other upstream 143691 1591955 ~ 1596479 (-)
trnat-agu_6 NA other upstream 190121 1638385 ~ 1638458 (-)
trnar-ucu_5 NA other upstream 190499 1638763 ~ 1638852 (-)

Expression


Co-expression Network