trnat-agu_7


Basic Information

Item Value
gene id trnat-agu_7
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 1650053 ~ 1650126 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnat-agu_7
GGCGCTGTGGCTTAGTTGGTTAAAGCGCCTGTCTAGTAAACAGGAGATCctgggttcgaatcccagcaGTGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-agu_7 True 74 tRNA 0.54 1 1650053 1650126

Neighbor

gene id symbol gene type direction distance location
med4 med4,LOC107673119,LOC107709409,LOC107724027 coding downstream 26004 1615900 ~ 1624049 (-)
trnal-caa_7 NA coding downstream 81196 1568745 ~ 1568857 (-)
LOC113524666 LOC108271633 coding downstream 83266 1554942 ~ 1566787 (-)
si:dkey-230p4.1 LOC108271988 coding downstream 97618 1529825 ~ 1552435 (-)
trnaw-cca_4 NA coding downstream 235314 1414668 ~ 1414739 (-)
mlphb LOC108261129 coding upstream 73131 1723257 ~ 1747031 (-)
cops8 cops8,LOC106581673,LOC107725246,LOC107723689,LOC107685920 coding upstream 208136 1858262 ~ 1871493 (-)
trim63b trim63b,LOC100194566,LOC100505419 coding upstream 212027 1862153 ~ 1863790 (-)
ranbp2 LOC108261082,LOC108440489 coding upstream 300006 1950132 ~ 1986039 (-)
lims2 LOC108261084,LOC108440488,LOC105898085 coding upstream 338414 1988540 ~ 1998073 (-)
G75740 NA non-coding downstream 182154 1467662 ~ 1467899 (-)
G75739 NA non-coding downstream 194766 1454999 ~ 1455287 (-)
G75737 NA non-coding downstream 216826 1433022 ~ 1433227 (-)
G75736 NA non-coding downstream 235876 1413842 ~ 1414177 (-)
G75734 NA non-coding downstream 253531 1396297 ~ 1396522 (-)
G75814 NA non-coding upstream 6247 1656373 ~ 1656848 (-)
G75875 NA non-coding upstream 72455 1722581 ~ 1722799 (-)
G75889 col6a3,LOC108262369 non-coding upstream 151146 1801272 ~ 1819183 (-)
G75880 NA non-coding upstream 199111 1849237 ~ 1873669 (-)
G75925 NA non-coding upstream 261070 1911196 ~ 1917438 (-)
trnar-ucu_5 NA other downstream 11201 1638763 ~ 1638852 (-)
trnat-agu_6 NA other downstream 11595 1638385 ~ 1638458 (-)
htr2aa NA other downstream 53574 1591955 ~ 1596479 (-)
G75770 NA other downstream 120540 1529070 ~ 1529513 (-)
trnak-uuu_2 NA other downstream 178492 1471489 ~ 1471561 (-)
trnar-ucu_6 NA other upstream 12394 1662520 ~ 1662609 (-)
trnat-agu_8 NA other upstream 23986 1674112 ~ 1674185 (-)
trnar-ucu_7 NA other upstream 24358 1674484 ~ 1674573 (-)
G75893 col6a3,LOC108262369,LOC106600155 other upstream 147856 1797982 ~ 1803645 (-)
LOC113547075 slc5a7,LOC108440498,LOC106586545,LOC106582186,LOC107733037 other upstream 397653 2047779 ~ 2064298 (-)

Expression


Co-expression Network