G104473 (map3k10)


Basic Information

Item Value
gene id G104473
gene name map3k10
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 24623516 ~ 24711368 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU123617
caggtgtgttagtgGGCGTGATGGGAGGAATTGGCATGCTGCCATCTGAGGGCGTGCGTCGGTGCTCTGTCACTGTCTGTGCACGAGGTCTGATGGCACCGTCAGATGGCGTGCGTCGGTGCCCGCGGTTCACAGCCATGGTGGCAGAGACATGGGTGGGTGTGAGCGACTGGTTGGGCTCCCGTTTGAAACTCTCTGCTCGCAGATCCAGCAGGGGGTTTAGAGCGGGTGCTGGACAAGGCATGGTGCTGCTCGGACTTGGGATCAGATCGTCTGGGTCTGAGGGCAGCAGGGACTTGGTGGAGTTGCAGtcagaaagagaggagagggagaggagtgTGACAGAAGGAGACGGGTCCAGGCAGGGCAGTGCAGATTCGTGATGATGGCGGTTGTgggacagggacagagacagtgtACGGCTTGGGGGAGATGTGCTGCGCCGGAATCGGCCTGTGCGCTGAAACAgaccttccttctttt

Function

symbol description
map3k10 Predicted to enable JUN kinase kinase kinase activity. Predicted to be involved in positive regulation of apoptotic process. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MAP3K10 (mitogen-activated protein kinase kinase kinase 10).

NR:

description
PREDICTED: mitogen-activated protein kinase kinase kinase 10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU123617 True 483 TUCP 0.60 2 24623516 24711368

Neighbor

gene id symbol gene type direction distance location
qpctla LOC108264841,LOC108433456,LOC107560141,LOC107662147 coding downstream 145544 24469967 ~ 24477972 (-)
tbcb tbcb,LOC107687357,LOC107662130,LOC107560142 coding downstream 181902 24436290 ~ 24441614 (-)
tmem123 NA coding downstream 190249 24427587 ~ 24433267 (-)
arfgap2 arfgap2 coding downstream 256257 24349599 ~ 24367259 (-)
large2 large2,gyltl1b,LOC107670096,LOC107554994,LOC107602128,LOC107670633 coding downstream 353921 24135378 ~ 24269595 (-)
znf296 LOC108264426 coding upstream 27723 24739091 ~ 24750597 (-)
siae siae coding upstream 56207 24767575 ~ 24776782 (-)
bckdha bckdha,LOC107560150,LOC107758241,LOC107662140 coding upstream 313449 25024817 ~ 25034882 (-)
ppp1r13l ppp1r13l coding upstream 395061 25106429 ~ 25135256 (-)
rasgrp4 LOC108264291,LOC108428524 coding upstream 443814 25155182 ~ 25182107 (-)
G104320 NA non-coding downstream 89097 24533737 ~ 24534419 (-)
G104291 six9,LOC108263903,LOC108433455,LOC107554476 non-coding downstream 158938 24414900 ~ 24464578 (-)
G103820 NA non-coding downstream 1047837 23572589 ~ 23575679 (-)
G103817 NA non-coding downstream 1110188 23512157 ~ 23513328 (-)
G103727 NA non-coding downstream 1293415 23329676 ~ 23330101 (-)
G104694 hnrnpul1 non-coding upstream 402609 25113977 ~ 25151156 (-)
LOC117597583 NA non-coding upstream 480689 25192057 ~ 25214790 (-)
G104747 NA non-coding upstream 527742 25239110 ~ 25241770 (-)
G104750 NA non-coding upstream 532104 25243472 ~ 25245244 (-)
G105092 NA non-coding upstream 1121911 25833279 ~ 25836038 (-)
sipa1l3 sipa1l3 other downstream 48841 24480302 ~ 24574675 (-)
rpl35a rpl35a,LOC107670602,LOC106612432 other downstream 884737 23732870 ~ 23738779 (-)
rnpepl1 rnpepl1,LOC107758061,LOC107671854,LOC107670589,LOC107602123,LOC107717622,LOC107575502 other downstream 923809 23648684 ~ 23699707 (-)
mmp23bb LOC108264351,LOC108440601,LOC107576217,LOC107758054,LOC107672246,LOC107670598,LOC107717605 other downstream 1013068 23590945 ~ 23610448 (-)
si LOC108264758,LOC108431149 other downstream 2316747 22231448 ~ 22306769 (-)
clasrp clasrp,LOC107758246,LOC107662138 other upstream 40285 24751653 ~ 24764161 (-)
tmem91 tmem91,LOC107676753,LOC107757682,LOC107758240 other upstream 332418 25043786 ~ 25079512 (-)
si:cabz01090165.1 zmp:0000001073,LOC108264041,LOC108429879,LOC107692477,LOC107722287,LOC107566287,LOC107713869 other upstream 673957 25385325 ~ 25548928 (-)
G105376 NA other upstream 1527962 26239330 ~ 26241005 (-)
LOC113526510 LOC108264700,LOC108261657 other upstream 1857717 26569085 ~ 26608339 (-)

Expression


Co-expression Network