G106667


Basic Information

Item Value
gene id G106667
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 28656990 ~ 28657189 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU126125
cacaggtacaaaacacatcacagcagaaaaaaatattgatttaaaggGAAGTGGGAAAGGTTAGCTGGGATCGATGGTGCTAAGCGAGTGAACACGTGCTCTGGGCAAGTTTacgaggaggagaagaagaacaaaaggaGGACTTATTTTGGAACAGAGAtgtagaagaagggaaaaatgGAGggataagaggaagaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU126125 True 200 lncRNA 0.42 1 28656990 28657189

Neighbor

gene id symbol gene type direction distance location
LOC113526963 LOC108264246,LOC107731261,LOC107663352,LOC107565335,LOC107572641,LOC108412231,LOC103374647 coding downstream 204675 28448739 ~ 28452315 (-)
dusp22a ds22a,LOC105892932,LOC108434600,LOC106562285 coding downstream 210052 28423797 ~ 28446938 (-)
irf8 irf8 coding downstream 234005 28415135 ~ 28422985 (-)
foxf1 foxf1 coding downstream 423603 28229438 ~ 28233387 (-)
LOC113526564 dbndd1 coding downstream 451364 28183533 ~ 28205626 (-)
LOC113526572 LOC108264241 coding upstream 112436 28769625 ~ 28774040 (-)
atmin atmin coding upstream 124835 28782024 ~ 28790810 (-)
cenpn cenpn coding upstream 134602 28791791 ~ 28799363 (-)
LOC113526432 cdyl2,LOC106562298 coding upstream 150918 28808107 ~ 28852636 (-)
mafa maf,LOC102790406,LOC101173775,LOC102192535,LOC102298902,LOC100702616,LOC107381304 coding upstream 535192 29192381 ~ 29205443 (-)
G106660 NA non-coding downstream 42447 28614267 ~ 28614543 (-)
G106657 NA non-coding downstream 47226 28608946 ~ 28609764 (-)
G106656 NA non-coding downstream 48949 28606258 ~ 28608041 (-)
G106655 NA non-coding downstream 51553 28604313 ~ 28605437 (-)
G106653 NA non-coding downstream 55455 28600119 ~ 28601535 (-)
G106674 NA non-coding upstream 30150 28687339 ~ 28688110 (-)
G106676 NA non-coding upstream 32266 28689455 ~ 28689974 (-)
G106678 NA non-coding upstream 38370 28695559 ~ 28697797 (-)
G106681 NA non-coding upstream 49941 28707130 ~ 28707742 (-)
G106682 NA non-coding upstream 50710 28707899 ~ 28709570 (-)
si:dkey-151j17.4 NA other downstream 1496891 27144888 ~ 27160099 (-)
LOC113526510 LOC108264700,LOC108261657 other downstream 2048651 26569085 ~ 26608339 (-)
G105376 NA other downstream 2415985 26239330 ~ 26241005 (-)
si:cabz01090165.1 zmp:0000001073,LOC108264041,LOC108429879,LOC107692477,LOC107722287,LOC107566287,LOC107713869 other downstream 3108062 25385325 ~ 25548928 (-)
tmem91 tmem91,LOC107676753,LOC107757682,LOC107758240 other downstream 3577478 25043786 ~ 25079512 (-)
hipk3b hipk3,LOC108264637 other upstream 963610 29620799 ~ 29714001 (-)
G107525 NA other upstream 1686342 30343531 ~ 30344876 (-)
bbs10 bbs10 other upstream 2070855 30728044 ~ 30732059 (-)
selenot1b LOC108264179,LOC108429894 other upstream 2128404 30785593 ~ 30849697 (-)
G107803 NA other upstream 2159390 30816579 ~ 30820422 (-)

Expression


Co-expression Network