qser1 (qser1)


Basic Information

Item Value
gene id qser1
gene name qser1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 23794190 ~ 23815913 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026913758.2
GCCAGAATGGGGAGCACCGCCGCCGTGCACAtctgagtgtgttttttttttttattttggagacTTTATTACACACTCTGATCAGCACACAGCTTTGCCATCTCCCATGCACATCCACCAGCGCGGATCGCCACCGAACCCGGCgcattttgtattaaaatgtgatCGCGGTACGCTTAATGTGTGAATGTTCCACAAAAGTCTGTCGGGAAACAGCGTGAGTCCTGAGCCCGTCGCGGGAGGATGGACGGACGCTACCTGGGTTCGGGCTTCGCGGAGCGGCGGGCCACATCAGGCGAGAGCGCGGATTGGGCCTACAGCAACCCGACCAGCTCCAGTTATGGTGCGACTCACATAGAGACAGAGCTTCCCCAACGGCAATCCTACGCCTCAAGTCATACACTCACTACCTACACCACCTCTCATCACCACACAGGTGTGTCTGGTGTCTTTGATAACAGTCTGCACACCACCGGAGGCAGCACTACTGAATCATCAGTCATGAATTTCCTCTCTTCCATTGAATCCCGAGGCCTTCAGGCTGGACCTGCAGCCACGTCTCTACTTCCCCAGTTCAGAACTTCACCATGGCAGACTGGCACAAATTCTTCAACAGAGCTCTTTCTTACTGGAGCTCTTCCTTCTTCTGGAACGTTTCCTACCCTGTCAGCTCTTTCTTCCTACCAGCACCCCAGCACCTTTCCCACTCGGAGTTTTCCCACCACATCTGCGTTAACTGTTCAGCACACTACGTTTAGCCCATCAAATGGACTGCTTTCACCTAATGACCCTCTACTTCAGATCAAATCTTCCCAAACCACTGTGCCAACAGCTTTTGCCTTTGACCGCCTGGGTGGTGCTTCCCTGGGTGCTAGCCTCCCAATCCAGTCATCCACATATCGTTCAGCCCAGGAGTCTGCACCACATCTCCTGCAGCCACAGTTCAGCCTCCTACCCTCTCCTTTGAGTAACTCTCAGCAGACTATTCCACCTTATGGAGCCCCAATTTTCTCCAGCTCCATCGAACGAGCACTTCAGCGTGAATGTAGTGTCATCAAGCACCACCAGCGGCCTTCCAGCACCCAGCCAGTCCAGCAGCAGCTGTCTGTCAGTGCACAACACTCTTTGCAAGATTACCTACCTGACGATGCTGATGTCTCGTACGAGGATCCTTCTCGACCTGTTGCAAACAGCCCCAATGGAATTCCCAGTCAGGCCATTAATAACACAGCTCAGCAGAAGACCGCCACAGTGCAGCTgcagcaaacacagacacattccTCGTCTGTGCCCTCTTCAGGGTTTTCCTCCACATCTGGAGTGAAAGCCAAGGATGATTCTAACAAAACAGCAGAGCATCTTGGGGAGGGCTCAGAGTTGCATGATCAGGCAGCCTCATCACCCATTCAGCAGCATAGGTATGCTTCCACAGCCCAGAAACATAGCTCTGTGATTGCTAGCCAGTCACAGCCATACACATCAGCACAGCTTTCCAGTTTGATGTCCATCGGCCCTTCACAGACATACATTACATCTCAAAGTCTCATGAGCAACCTTAGTGAACCACAGGCCTTCTCTCCCAATCAGCCTGAGAAACTACCTTCTATATACAAAACGTTGCCGTCGTTGGCTACTCAGTCAGAAAACGAGACATCTGTTAGCCACTCTCTAATGTACGCTTCTGGCCAAAAGCACATAATGTCTTCAGCATCAAACAGAGAGGAGTATGATGAGCAGACGCAAAGACTTTGTATGGGCAATGCCTCTCACAATTATTCTTCCAGTCACTCTCAGAGTCTGTCCACTGTCAGTTATTATGCCCAGGGAGCAGAATCTGTTAGTCCCTCTCAGAGCTATGCATCAGGCCAGTCTCTCACACCAAGTCCTCCATTCTCTTCCTCCTATGGCCACAGCTTACCATCCAGTAATTCCACCCAGGATTACACCCTAATGCAGCCTTCTCCAAACAAGACAGATGGTATACTGTTGCAGCAGACTCAGAAATACTTGCTGTCTGACCAGTCAACATCATCCACTGCCGCTTATACACAAGCCATCCAGAACAACCAGTCCTCAGTGGAACAAAACCCAGCCTATGGCAAAGGGAAGGAAGATGAGAGTCTGTTCCTCACCTCCAAAGAAAACTGTGGAGAGCTTCCTATTCAAGATATGCAGGCATTACAACAGGCTTCAATAAGTAGTTCTACCCAGACTGTCGCAAACAATGATGTTGGGGTGCAGAGCAATGTTGTATATGTTGTTTCAAAAATGGAAGACAGACAAGCACATAGCGTCATCCGAAGCAACTCTCGATCCGAGGATCAGCTAATAGGTCTTGCACCAATGTCATCTATCAAGGATGAGAGAATGAGTACTTTAATTGGGCAGTTGGTAAGCACTGCCCATTCTCATGTAACCTCTGGCACAAAAAATAACTCTACATTAATGCAGTCCTCCCATGTGGCCTTGAGCACTGATCAGTTGAAAGAACACGCTGTGCTTCTCAAAGTTCCCACTGCTCAGCAAGAGGACCAGCAAACTCAGAGTAACAGAGGAGATCAGAGGCAGTTGTCACAGGAACAGGCACAGTTCATTCAGCTACCCAGTGCCCAAGTCCTTCTGGAGCCCTCACAGATGATCCTTCTTCAACAACCTTTGCTCCACACAGGGACAAATCAGTCTAAGCCAGTCCAAATGCAGCCAGTTTCGGTTCAGTTCCTgcaaatgaataatgaaatccTGAATTCCGCAGTCAGTGCAATTGAGAATCCGCAGATAACCCACCAAGTTGTGGAGTCCACAAAGCAACATCTGGTACAAAAAGACAGTTTCAACAATTCAACAAATCAGCATGATGCCAAACAGCACTTTACCTTAAGCTCCATCTGCTTCCCTGATTCCATGCTGATGGCAGATGAGAGGAACATTCTGTCCAATGTGGATGACATCCTAGCTGCCACAGCAGCTGCCTGTGGAGTCACACCACAGGACTTTAAAACCTCGTCCTCTGAAGGGGACTTAGCATCGATATCCAGCCCTTCAGACTCTAAGTGCCACTATGAGTTAGTTAATAACAAGCATGAACCTAATAGCTACTCTTCACAGCAcatgatctcaaacacacagacCATTACTTTATCTGTAAATGGTGGTCAGCTGACAACAGACATTCACAAAGAAGTTGATGGACATCAAGCATTTACACCAccaaactctcacacacagcaaaaTAACTCTAAGCATGAAATATCTGAGAAAGTGACAAATCATCACAAGAAAAATGAGGTATTACCCAAGGAACTTATTAGCAATGATTCTTCTTTGAATTCTAACGGAGGTACTATAAACACGTTTGCCAACAACCACACAGACTTTCACATAATCTCCCAGGAATATAACCCAAATAAGAATCAACCCAAAGTAGTGAAGAGTGTTAAGATGGAGGAAAAATTTGCAGAATACTCCTCTGATGGTCTTCCTAAGAAGCGCGTCAGGTCAAAAGGTTCTTCCAAGCAAGCTACCGAAGATGAAAATGGTCAACCTAAAACTCAAAAAAGAAGTGGCCAAGTAAAGCGACAGAACTCCAAAGGAAGTGAGACAAGTTCGTCCTCTACCTCTGAGGGCTGTCTTGATAGCTACCAGCAACAAGAAAGAATACGGCAAAAAATAAGAGAGGTAGAAGAAAAACAGCCAGAAGTTAAAACTGGGTTCATTGGATCTTTCCTAGACTTTCTTAAATCTGGACCCAAGCAGCAATTCTCCTCTCCACCCATACGGTCACCCAACCgcacaagaaagtcttcagttACCAAAAGACCTTTTAATCAATTGTCAGTGCCCCCTAAACTCATACCCCCATCAACTTCACTGGTTTCACCAGACATCAGTACTGTTAGCTCTACTAAAAGACTGGATGAGGAGCTTCACAAGAACTTGGAGACACTTCCATCTTTCTCCTCGGATGAGGATGAATCAGTTGGTAAAAACCAAGACCTTCAAAAGAGCATTAGTTCTGCACTCTCCTCTCTAGACGAGCCTTCAGACAAGCAACAGTCAGACAGCAAAAGTTCAGGTGACACCACAAGTCAAGAGCAGTCATCCAGCATCCAGTCTGCAGATACAAAGCTAAAGGAGCAGCAAAAGCCTGGGCTGAATGAAGTGCCAGTAGAGGAACTGGTGAAGAACATACCTGCCAACAAACTTGCGGTATGCCTGACCACCGTAGCTATCGAAGGCCTCACGGATGAGGAGCTGTCAGACAGTGGGGAGGAGGGCATGTACCGAGAACGTGATGAGTTTGTGGAAAATGAGGACATAGAAAGCTTGCAGGTCACACTGAAGGCAGGAATAGAACCTCCAGCCATTTGGAAGGTGCAAAAGGCCTTGCTGCAGAAATTCATACCCGAGCTGAGAGATGGAAAACGAGTGTTTTCTGCTACGAACAGTTATCTGGGTTACTTTGGAGATGCTAAAACAATGTACCGGAGAGTATACGTCAAGTTTCTCGACACTGTGAACAAGCGGGAGTACGTGCGAGTCTGCAACAGAAAACCAAGGTGCAAGCCCATGCATTCCATGAGAGGCTCTCAGAAGGCTCTGCTGGCCCAGAGAGCTGCCGCACCAGCCATGTCCGACTCCTCCGCTCTGAAATCCAGCACAAAGCAAAGCTTGTCCAAACCCAGGCCAAAGCAGCCAAAAGCCAAGGCCGAACCTCCAccgaaaaaaaggaagaaatggaAGGAGGAATTCACAGACTCAACAGAGTTGGCTTCTCCCGAAGCTGCAGGTGAAGATGATGAGTTTATACCTCCGGTCCCATTTGCCTCACGCTTCCTCAACACCAGGACGATGAAGGAGACCTTCAAGAGTTTCGTGGAGCTCCTGATCAGCGTTGCTCTGGACGCAGACGTCATGATCACACTGGAGAGAGAGAACGATGAACTTCTGCTGCCTCATATGAAGAGAGTGGATGGCATGATCACAGACAACAGGAGGAGGCTGCTGCCCAAACTGCGAGTGGGTCAGGTGTTCAAAAATGCTTTAGACAGCTTTCCCGAGTTGTCAGTGGTGACAGAGCTGAAAACAGATGGAGAGACCCCCACTTTTAAAGTCAGACTGAGTGGGAAAGCGTACAACAGGAAGACTATGAAACCTGCTAAATCCCCTGTTAAACTTCCCTTGGAGTACACAGTGGAGCAGCAGAAAACTCACTGGTTTTCTCTCTATCATTCACTGCAGCACTACAAGTATCACACATATCTGATGTGTATGGAAGAGATTGCACTGTTGCGCTCACGCGGCGTGGATCTGGGGCAGGAGGAGACTGTGCAGACATGCATGGGGAACCAAGTGTGGGTGGAGGGTCTGTTTGACCGCTTCGGAGAGCTTCTCACCCAGGTGCAGCAGGCCTGCCTTTAACCAGACAGTAGAACAACAAGTGGATGCAGTTGATGGGCCCTTTCTAAAGCACTAACTGATAAGATGGATATGGAGAACCACCAGAAGATGGAAAAGCACCATGGGAATCATGTGAAAACTCTGAGAAGATGATTAATCATAAGAAGAGCCACTAGAAGCTGGAGAACTGTCTGAAGATGGAAAACTCTAAACTATGTACAGACatgagaagatgaagaaaatggCGAATCTCAAGAAACAGAGAACCATGAAGGGAGAGAAAAACCCTGAGAGGGTGAAGAACCCTGAGgatagccattagaagatggagAAGGTGGAGAATCACAAGACGATGGAGAACCACAAAAAAACGACATGTTGAAGCATTAGACTGAGAAGCATTAAACGAGCATTTCACACCATTAGaatatgaaaaggaaaaaatgtgataaaaacaTTGAACCATGAGGAGACTGTAAGATAATGGAGAATTGAAGACAAGAAGATGGAGAACCTCAAGAAAAACTGGGAATTATAAATAGATTATGAAACACATGAAGATTTTTATAAGAATTTATACAAAGTACAGCGGCAGAACTTAGATGTCTGTTCTTGGAACCACAGAGACAATAGATTTTAGTCATGGTCTTTTTAAAAATCGTGTTttaagttttttattattatctaatcGGCCAAACTGGACACAGATGACACGAAAGTTGGCCGATTGTCATTCTCTGATGGTTAATGAATGTGTGGTACAGGGCGATTTACCTTGAAATTTTGGAacactaattttaaaaagaacaacATTTGAGTTTGGAGAAAGAGGGGTGCTAAtgattgtataaatatataaatacatagatatatatgtaaaaaactTTCTATATGATAGTGTACATTTTGTAAAGAGAGCTCTTTGGATGGATTTGACTCTTTATGTGCTTTTAAACTCCTTTTATATGACAGAGGTTATAAAGATGGAGTTGGTGCAATTCTAATACATCTTTTGTGATAATGTTGTAATAAACAGCATTGGAACTATTTTCTTGCAGGAAACTATATTTTATAGTCACTCAAAACCCTTTatcttaaacataaatgtatttttccacAAAGGAAATATTGTTTCCTGATCATTTTGTGGTACACTCTGTTTTACAAAAGAGATGCCCAGTGTGTTTATATGGTAAATTTCTATCCCTGACAGTGTGTCTTAAGATCACTTCTTTACTGTAGAATATTACAAATTTGCCGCAGTTTTGCACAGATTACGATGCTTTTGCTTTTCAACTGTAGCTGTGATACAACCTGCGAGTATTTTTTTGATATGCGAAAAATAAATTTCCTACCATTGAA

Function

symbol description
qser1 Orthologous to human QSER1 (glutamine and serine rich 1).

NR:

description
PREDICTED: glutamine and serine-rich protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026913758.2 True 6759 mRNA 0.45 14 23794190 23815913

Neighbor

gene id symbol gene type direction distance location
depdc7a depdc7,LOC107576633,LOC107758055 coding downstream 7861 23765537 ~ 23786329 (-)
abcc5 abcc5,LOC107670605,LOC107671530 coding downstream 62775 23701784 ~ 23731415 (-)
LOC113526489 dvl3,LOC107670590,LOC107575491,LOC107671937,LOC107758060,LOC107717599 coding downstream 115732 23634077 ~ 23678458 (-)
ap2m1b ap2m1b,ap2m1,LOC108264350,LOC108440593 coding downstream 161823 23615371 ~ 23632367 (-)
mtif2 mtif2 coding downstream 212110 23578039 ~ 23582080 (-)
prrg4 prrg4 coding upstream 770 23816683 ~ 23826844 (-)
eif3m eif3m coding upstream 19259 23835172 ~ 23843472 (-)
kifc3 kifc3 coding upstream 61794 23877707 ~ 23926937 (-)
cngb1a LOC108264061,LOC107717637 coding upstream 116985 23932898 ~ 23974188 (-)
large2 large2,gyltl1b,LOC107670096,LOC107554994,LOC107602128,LOC107670633 coding upstream 319465 24135378 ~ 24269595 (-)
G103820 NA non-coding downstream 218511 23572589 ~ 23575679 (-)
G103817 NA non-coding downstream 280862 23512157 ~ 23513328 (-)
G103727 NA non-coding downstream 464089 23329676 ~ 23330101 (-)
G103719 NA non-coding downstream 470778 23321663 ~ 23323412 (-)
G103702 rps3,LOC107600794 non-coding downstream 518908 23270144 ~ 23275282 (-)
G104291 six9,LOC108263903,LOC108433455,LOC107554476 non-coding upstream 598987 24414900 ~ 24464578 (-)
G104320 NA non-coding upstream 717824 24533737 ~ 24534419 (-)
G104694 hnrnpul1 non-coding upstream 1298064 25113977 ~ 25151156 (-)
LOC117597583 NA non-coding upstream 1376144 25192057 ~ 25214790 (-)
G104747 NA non-coding upstream 1423197 25239110 ~ 25241770 (-)
rpl35a rpl35a,LOC107670602,LOC106612432 other downstream 55411 23732870 ~ 23738779 (-)
rnpepl1 rnpepl1,LOC107758061,LOC107671854,LOC107670589,LOC107602123,LOC107717622,LOC107575502 other downstream 94483 23648684 ~ 23699707 (-)
mmp23bb LOC108264351,LOC108440601,LOC107576217,LOC107758054,LOC107672246,LOC107670598,LOC107717605 other downstream 183742 23590945 ~ 23610448 (-)
si LOC108264758,LOC108431149 other downstream 1487421 22231448 ~ 22306769 (-)
sertad3 sertad3 other downstream 2781090 20995341 ~ 21013100 (-)
sipa1l3 sipa1l3 other upstream 664389 24480302 ~ 24574675 (-)
G104473 map3k10 other upstream 807603 24623516 ~ 24711368 (-)
ttc9b ttc9b,LOC108433430,LOC107756857,LOC107560155,LOC107758251,LOC107662133 other upstream 815726 24631639 ~ 24661978 (-)
clasrp clasrp,LOC107758246,LOC107662138 other upstream 935740 24751653 ~ 24764161 (-)
tmem91 tmem91,LOC107676753,LOC107757682,LOC107758240 other upstream 1227873 25043786 ~ 25079512 (-)

Expression


Co-expression Network