trnaq-cug_10


Basic Information

Item Value
gene id trnaq-cug_10
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 13645409 ~ 13645480 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnaq-cug_10
GGTTCCATGGTGTAATGGTTAGCACTCTGGACTCTGAATCCAGCGATCCGAGTTCAAATCTCGGTGGAACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaq-cug_10 True 72 tRNA 0.50 1 13645409 13645480

Neighbor

gene id symbol gene type direction distance location
dennd4a dennd4a coding downstream 1837 13612796 ~ 13643572 (-)
ints14 vwa9,LOC107583765,LOC107596981 coding downstream 56425 13582928 ~ 13588984 (-)
ppcdc ppcdc,LOC107583771,LOC107742893,LOC107686355,LOC107738727,LOC107672202 coding downstream 69592 13571853 ~ 13575817 (-)
arl2bp arl2bp,LOC108264832,LOC107686354 coding downstream 119435 13522151 ~ 13525974 (-)
tgm2l LOC108264831,LOC108423869 coding downstream 139957 13494603 ~ 13505452 (-)
megf11 megf11,LOC107596974,LOC107686294,LOC107672222 coding upstream 6578 13652058 ~ 13763456 (-)
rpl4 rpl4,LOC107718306 coding upstream 140667 13786147 ~ 13789542 (-)
LOC113534851 NA coding upstream 141298 13786778 ~ 13786848 (-)
LOC113534850 NA coding upstream 141654 13787134 ~ 13787202 (-)
LOC113534844 NA coding upstream 142177 13787657 ~ 13787786 (-)
LOC117597528 NA non-coding downstream 327401 13311395 ~ 13318008 (-)
G98790 NA non-coding downstream 462859 13182343 ~ 13182550 (-)
G98776 NA non-coding downstream 510236 13129200 ~ 13135173 (-)
G98767 NA non-coding downstream 616812 13027458 ~ 13028597 (-)
G98607 NA non-coding downstream 806867 12838220 ~ 12838542 (-)
G99118 LOC108280567 non-coding upstream 95 13645575 ~ 13647786 (-)
G99134 NA non-coding upstream 87471 13732951 ~ 13768470 (-)
LOC113534845 NA non-coding upstream 119446 13764926 ~ 13765056 (-)
LOC113534347 NA non-coding upstream 137295 13782775 ~ 13784737 (-)
LOC113534852 NA non-coding upstream 138075 13783555 ~ 13783624 (-)
c6h15orf39 c4h15orf39 other downstream 82835 13550680 ~ 13562574 (-)
G98770 NA other downstream 593098 13045823 ~ 13052311 (-)
akip1 LOC108264820 other downstream 1221431 12420437 ~ 12423978 (-)
znf143b znf143,znf143b,LOC107672322 other downstream 1240128 12396507 ~ 12405281 (-)
admb NA other downstream 1299957 12311822 ~ 12345452 (-)
dennd11 kiaa1147,LOC107738692,LOC107686315 other upstream 690456 14335936 ~ 14347008 (-)
tmem170a tmem170a,LOC106573739,LOC107596918 other upstream 1701686 15347166 ~ 15357563 (-)
G101178 NA other upstream 4541967 18187447 ~ 18196806 (-)
LOC113527007 NA other upstream 6334589 19980069 ~ 19980259 (-)
akt2 akt2,LOC108264340,LOC107711004,LOC107557843,LOC107692744,LOC107714435,LOC107572728 other upstream 6750386 20395866 ~ 20416574 (-)

Expression


Co-expression Network