G24760


Basic Information

Item Value
gene id G24760
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 10489293 ~ 10490295 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU29342
gtctatggcagtcctggtggcagcggagaggcatctctggctgaccctgtccgatatgaaagagaaggacagggtcgtgctcatggacgccccgcttactccctcgggcctgtttggcgacgcggtagactccgtcgtcgagagataccagcaggcccgtgctcaggcggcggcgttccagcggttcctcccccgtcgctctctagctcgtggggctgccgggcgggggcagccccctccgtgtacggccccctcctacagggaggcccaaaagcagagcgtcgcctcccgtgcGCCCCGAGGCGGGAGAGCAGGAGCGCgacgacgctctgggcccggcccttcgggcactaaggcggatctgaggaccgtcctcatgtccagaagggccgcggctaagaagccctgatggttttggcccagggcttccgagggcgggcccctctggggcgacgcggcgtacacctcatcttacggtgcccgggtccccccagtgccctcaggaggtcgatctgccaaccctgccacctatggtgcttcagggcgcagcggtctccagcgagcgcctctcccagttctcgcccggcaacgtagcgggtctgggaggctcgcggcctctcctgaggccttcgcagcggttagctcatttcccccatgtcggttcgccgcctcagggcacccagctaaccgcttctattacaccagaggtcagtctcgagagactgattcccttagtgagctttctggcagcgtggaaacttctgccgaatgtgtctcattgggtcctgcgtactgtagaaagaggctaccgaattcagttcggctcgcctccacctcatttttctggggttcttcccactgtggtgggtcccgagcaggctctggtattggagcaggaagtacgtactctcctgaggaaggaggccatcgaggtggtccctcctcacgacagggagtcagggttctacagccggtacttcattgttcccaagaaggggggagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29342 True 1003 TUCP 0.64 1 10489293 10490295

Neighbor

gene id symbol gene type direction distance location
gcnt7 LOC108272018,LOC108272017 coding downstream 149966 10335393 ~ 10339327 (-)
eya2 eya2,LOC107666141,LOC106565282 coding downstream 230074 10241254 ~ 10259219 (-)
LOC113532087 LOC108271496 coding downstream 269912 10213908 ~ 10219381 (-)
slc12a5a slc12a5,si:ch211-59d13.2,LOC107744354 coding downstream 290902 10044762 ~ 10198391 (-)
ctsa ctsa,LOC107587598,LOC107696438,LOC107744356,LOC107666023,LOC107560512 coding downstream 455843 10025424 ~ 10033450 (-)
LOC113532783 cdh22,LOC107553911,LOC107666158,LOC107587604,LOC107681302 coding upstream 62616 10552911 ~ 10743445 (-)
znfx1 znfx1 coding upstream 384629 10874924 ~ 10885023 (-)
ddx27 ddx27,LOC107553908,LOC107587605,LOC107681294 coding upstream 398117 10888412 ~ 10903945 (-)
snrpb snrpb,LOC108272150 coding upstream 415900 10906195 ~ 10910484 (-)
cbfa2t2 cbfa2t2,LOC107681292,LOC107740270,LOC107666150 coding upstream 496013 10986308 ~ 11011812 (-)
G24623 NA non-coding downstream 318118 10170970 ~ 10171175 (-)
G24620 NA non-coding downstream 320824 10168211 ~ 10168469 (-)
G24617 NA non-coding downstream 328052 10161032 ~ 10161241 (-)
G24611 NA non-coding downstream 337128 10151817 ~ 10152165 (-)
G24572 NA non-coding downstream 550250 9938256 ~ 9939043 (-)
LOC113534445 NA non-coding upstream 476401 10966696 ~ 10984007 (-)
G25184 NA non-coding upstream 531228 11021523 ~ 11021725 (-)
G25185 NA non-coding upstream 532144 11022439 ~ 11022641 (-)
LOC117599085 NA non-coding upstream 767469 11257764 ~ 11262304 (-)
G25320 NA non-coding upstream 836531 11326826 ~ 11329556 (-)
G24516 NA other downstream 621015 9863367 ~ 9868278 (-)
tnnt2b tnnt2,LOC108441587,LOC107696448,LOC107595452 other downstream 763242 9715516 ~ 9726051 (-)
tusc2a LOC108271982,LOC108433681,LOC104930950,LOC107595412,LOC107724521 other downstream 1047448 9435506 ~ 9441845 (-)
tcta glyctk,tcta,LOC106582802,LOC106565977 other downstream 2005112 8479374 ~ 8484181 (-)
arl6ip5a arl6ip5,LOC107680705,LOC107750278,LOC107599422,LOC108424109,LOC107667022,LOC107713508,LOC107584514 other downstream 2137599 8343624 ~ 8351694 (-)
itcha itcha,LOC108271999,LOC108431834,LOC107681287,LOC107666068 other upstream 425747 10916042 ~ 10934164 (-)
kif5ab kif5a other upstream 952176 11442471 ~ 11485469 (-)
LOC113526127 LOC108272031,LOC108431803 other upstream 1196450 11686745 ~ 11764135 (-)
slc5a8l slc5a8l,LOC108272176,LOC108427595,LOC107708058,LOC107685825,LOC107554166,LOC107666019,LOC107596840,LOC105007571,LOC107729725 other upstream 3003217 13493512 ~ 13502170 (-)
rps26l rps26,RPS26,rps26l,LOC107708153,LOC107554198 other upstream 3141967 13632262 ~ 13634744 (-)

Expression


Co-expression Network