G26570


Basic Information

Item Value
gene id G26570
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 13070595 ~ 13070823 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU31363
CTTCCTCTTTCTGTAGCTAGAAAATGCCAAAGTGCACCATTTGCGTTCAACCGCCCTGTAGAACCACAAGCTGTAACCCTGGCTACAGTTTTAACAGGAGGTCCATTCCTACTGTCACAGTGCAATAGATTTCTTAATTGCTTACACCAAGAATAGCTTTCTGTGCATAGGCCAGTGCACAATAGGTGTGTCCAAAAGTTCTTCCTTCTTTATGCTCCAGAGAACCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU31363 True 229 lncRNA 0.44 1 13070595 13070823

Neighbor

gene id symbol gene type direction distance location
slc2a1b LOC108427584,LOC108272033,LOC103036684,LOC106565867,LOC103355644,LOC106518313,LOC108231650 coding downstream 11828 13042395 ~ 13058767 (-)
si:dkey-166d12.2 LOC108271835,LOC108427581 coding downstream 39550 12949685 ~ 13031045 (-)
lrig2 lrig2,LOC107729721 coding downstream 146608 12905112 ~ 12923987 (-)
LOC113526469 magi3,LOC108427579,LOC107569295,LOC107668158,LOC107729719,LOC564220 coding downstream 168571 12789724 ~ 12902024 (-)
im:7151449 NA coding downstream 293638 12765448 ~ 12776957 (-)
st7l st7l,LOC103035765,LOC106582738,LOC106566045 coding upstream 90666 13161489 ~ 13173670 (-)
capza1a capza1,LOC108271791,LOC103046653,LOC106566046,LOC105908306,LOC106582739 coding upstream 107005 13177828 ~ 13189549 (-)
rhoca rhoc,LOC108427591,LOC103035456,LOC108271788,LOC105908082,LOC107729745,LOC107668165,LOC105902219 coding upstream 144118 13214941 ~ 13231740 (-)
ppm1j ppm1j,LOC108427592,LOC107666087,LOC107668166,LOC107729744,LOC107708158 coding upstream 164113 13234936 ~ 13251911 (-)
LOC113537313 NA coding upstream 167881 13238704 ~ 13238806 (-)
G26387 NA non-coding downstream 269362 12801007 ~ 12801233 (-)
G26385 NA non-coding downstream 276156 12794238 ~ 12794439 (-)
G26137 NA non-coding downstream 504535 12563790 ~ 12566060 (-)
G26138 NA non-coding downstream 509352 12561032 ~ 12561243 (-)
G26134 NA non-coding downstream 512434 12557600 ~ 12558161 (-)
G26585 NA non-coding upstream 33634 13104457 ~ 13106086 (-)
G26610 NA non-coding upstream 98430 13169253 ~ 13169662 (-)
G26613 NA non-coding upstream 104254 13175077 ~ 13176159 (-)
G26788 LOC108271946 non-coding upstream 439553 13510376 ~ 13568936 (-)
G26970 NA non-coding upstream 576624 13647447 ~ 13694820 (-)
LOC113526127 LOC108272031,LOC108431803 other downstream 1306460 11686745 ~ 11764135 (-)
kif5ab kif5a other downstream 1585126 11442471 ~ 11485469 (-)
itcha itcha,LOC108271999,LOC108431834,LOC107681287,LOC107666068 other downstream 2136431 10916042 ~ 10934164 (-)
G24760 NA other downstream 2580300 10489293 ~ 10490295 (-)
G24516 NA other downstream 3202317 9863367 ~ 9868278 (-)
slc5a8l slc5a8l,LOC108272176,LOC108427595,LOC107708058,LOC107685825,LOC107554166,LOC107666019,LOC107596840,LOC105007571,LOC107729725 other upstream 422689 13493512 ~ 13502170 (-)
rps26l rps26,RPS26,rps26l,LOC107708153,LOC107554198 other upstream 561439 13632262 ~ 13634744 (-)
fkbp11 fkbp11,LOC108271940,LOC108271564 other upstream 569558 13640381 ~ 13647177 (-)
lhfpl4a lhfpl4,lhfpl4a,LOC107656118,LOC107586345,LOC107710167 other upstream 794121 13864944 ~ 13907189 (-)
G27107 LOC108272123 other upstream 979578 14050401 ~ 14058445 (-)

Expression


Co-expression Network