Gene
RNA
| Item | Value |
|---|---|
| gene id | G30550 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 20480112 ~ 20480726 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU36047 | True | 615 | lncRNA | 0.41 | 1 | 20480112 | 20480726 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mrpl47 | mrpl47 | coding | downstream | 151653 | 20324858 ~ 20328459 (-) |
| tmem131 | tmem131,LOC107659030 | coding | downstream | 169886 | 20265313 ~ 20310226 (-) |
| LOC113534100 | bivm,LOC107548643,LOC104949108 | coding | downstream | 221559 | 20250115 ~ 20258553 (-) |
| nme7 | nme7,LOC107659027,LOC107731836,LOC107732015,LOC107692347,LOC107590639 | coding | downstream | 234104 | 20207755 ~ 20246008 (-) |
| dpt | dpt | coding | downstream | 296818 | 20172128 ~ 20183294 (-) |
| lrrc7 | lrrc7,LOC107709201 | coding | upstream | 202821 | 20683547 ~ 20814820 (-) |
| zgc:153311 | LOC108271850 | coding | upstream | 403799 | 20884525 ~ 20886833 (-) |
| lurap1 | LOC108271563 | coding | upstream | 482663 | 20963389 ~ 20978637 (-) |
| ttc4 | ttc4,LOC107709194 | coding | upstream | 508959 | 20989685 ~ 20994441 (-) |
| pars2 | pars2 | coding | upstream | 515362 | 20996088 ~ 20999389 (-) |
| G30507 | NA | non-coding | downstream | 75704 | 20404209 ~ 20404408 (-) |
| G30428 | NA | non-coding | downstream | 164601 | 20314838 ~ 20315511 (-) |
| G30423 | NA | non-coding | downstream | 231603 | 20248166 ~ 20248509 (-) |
| G30422 | NA | non-coding | downstream | 232775 | 20247111 ~ 20247337 (-) |
| G30421 | NA | non-coding | downstream | 233241 | 20246605 ~ 20246871 (-) |
| G30551 | NA | non-coding | upstream | 454 | 20481180 ~ 20482701 (-) |
| G30552 | NA | non-coding | upstream | 11758 | 20492484 ~ 20495517 (-) |
| G30561 | NA | non-coding | upstream | 26426 | 20507152 ~ 20507352 (-) |
| G30879 | NA | non-coding | upstream | 26656 | 20507382 ~ 20548637 (-) |
| G30899 | NA | non-coding | upstream | 95235 | 20575961 ~ 20657383 (-) |
| pex5la | pex5l,pex5la,LOC107709207 | other | downstream | 50787 | 20359722 ~ 20429325 (-) |
| glmnb | LOC108272089 | other | downstream | 466018 | 20003359 ~ 20014094 (-) |
| trnap-ugg | NA | other | downstream | 1662914 | 18817127 ~ 18817198 (-) |
| LOC113537624 | NA | other | downstream | 1663300 | 18794025 ~ 18816812 (-) |
| trnag-ucc | NA | other | downstream | 1663782 | 18816259 ~ 18816330 (-) |
| lepr | lepr | other | upstream | 800638 | 21281364 ~ 21317823 (-) |
| raver2 | raver2 | other | upstream | 968820 | 21449546 ~ 21531428 (-) |
| ccdc17 | ccdc17 | other | upstream | 2091706 | 22572432 ~ 22581943 (-) |
| gpbp1l1 | gpbp1l1,LOC107731630,LOC107551044,LOC107725200 | other | upstream | 2101577 | 22582303 ~ 22593861 (-) |
| dmrt2b | LOC108271504 | other | upstream | 2741567 | 23222293 ~ 23225548 (-) |
