G31481


Basic Information

Item Value
gene id G31481
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 21532248 ~ 21532459 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU37132
ctggagggcactgAACACTCAGTTACTTGAGTTTAATTATATCAGTCAACATTGTCAGTCAACATTACaattgaaaataaagagaaagaaatgagaaaatacACTTCTCTTCTGAATGTGccgtgatcttcaggaaattcagatgatgcggtttcctgttgaacatgtgatttGTGGAATATTCTAGCTATTTCATGGGGTAAACATGGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37132 True 212 lncRNA 0.36 1 21532248 21532459

Neighbor

gene id symbol gene type direction distance location
ak4 ak4,LOC107590615,LOC107659053,LOC107692375,LOC107591174 coding downstream 131320 21386910 ~ 21400928 (-)
dnajc6 dnajc6 coding downstream 153474 21342709 ~ 21378774 (-)
pde4ba pde4b,pde4ba,LOC108443455,LOC107692372,LOC107659050,LOC107591166,LOC105913193 coding downstream 270133 21112205 ~ 21262115 (-)
sgip1a sgip1 coding downstream 447485 21017926 ~ 21084763 (-)
pars2 pars2 coding downstream 532859 20996088 ~ 20999389 (-)
cachd1 cachd1,LOC107692379,LOC107556548 coding upstream 6540 21538999 ~ 21579079 (-)
ror1 ror1,LOC107731648,LOC107556549,LOC107591177 coding upstream 102108 21634567 ~ 21756087 (-)
pgm1 pgm1,LOC107591179,LOC107704513,LOC107731639,LOC107739071,LOC107692428 coding upstream 232456 21764915 ~ 21777950 (-)
alg6 alg6,LOC107704515 coding upstream 264101 21796560 ~ 21815679 (-)
foxd3 foxd3,foxd1 coding upstream 290283 21822742 ~ 21825474 (-)
G31454 NA non-coding downstream 120075 21389477 ~ 21412173 (-)
G31298 NA non-coding downstream 146972 21384409 ~ 21385276 (-)
G31094 NA non-coding downstream 466510 21062894 ~ 21065738 (-)
G31070 NA non-coding downstream 571857 20960172 ~ 20960391 (-)
G30899 NA non-coding downstream 874865 20575961 ~ 20657383 (-)
G31486 NA non-coding upstream 37397 21569856 ~ 21612822 (-)
G31489 NA non-coding upstream 70085 21602544 ~ 21603863 (-)
G31491 NA non-coding upstream 74937 21607396 ~ 21609167 (-)
G31492 NA non-coding upstream 82862 21615321 ~ 21615675 (-)
G31681 NA non-coding upstream 571739 22104198 ~ 22104411 (-)
raver2 raver2 other downstream 820 21449546 ~ 21531428 (-)
lepr lepr other downstream 214425 21281364 ~ 21317823 (-)
pex5la pex5l,pex5la,LOC107709207 other downstream 1102923 20359722 ~ 20429325 (-)
glmnb LOC108272089 other downstream 1518154 20003359 ~ 20014094 (-)
trnap-ugg NA other downstream 2715050 18817127 ~ 18817198 (-)
ccdc17 ccdc17 other upstream 1039973 22572432 ~ 22581943 (-)
gpbp1l1 gpbp1l1,LOC107731630,LOC107551044,LOC107725200 other upstream 1049844 22582303 ~ 22593861 (-)
dmrt2b LOC108271504 other upstream 1689834 23222293 ~ 23225548 (-)
uap1 uap1,LOC107724142,LOC107551035 other upstream 2082995 23615454 ~ 23632013 (-)
nbeal1 nbeal1 other upstream 4147631 25680090 ~ 25738817 (-)

Expression


Co-expression Network