frs3 (frs3,LOC107667350,LOC107584505,LOC107568202,LOC107673473,LOC107712068)


Basic Information

Item Value
gene id frs3
gene name frs3,LOC107667350,LOC107584505,LOC107568202,LOC107673473,LOC107712068
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 16372782 ~ 16386220 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026912883.2
TCCAGCGTCTCTACCTTCTTGCCGCTCCATCAGCCCTCGTTGGCTGGCTGAACTCTCACCCCGGCGCTCGGCAAATGTCAAAGAGAGGCCCGTGCCGCAGCAAGGGGGCGTTGAGGGGGAAAAACAACTGCCTTTCTAATCTTTTCTATCAacccagttttttttaaaatcataaaaaataaataaataataataattaaaaaaaaaaaaaaaaaaaaaacagctcactGGAAGGATTATTGTAAGTGACGGAAGCGAGGgacagccagccagccagccagccagcagCCCGCCTCCTGTGTGCAGCACCGCGGACCCGCACCGCAGCTCCATCGCTCTCGTTCCGCGCTCTGCTCGCTGCCAGACATGAGATATGAAAGGTTTGTGCACTGGGACCTGCTGCTCATACCAGCACACCCCTGTTCCACCATGACCCCCAGCAGAGAATTCTGGGATTGACGGTAGCATCACTCCCACTGATGGCCTGCACCAGGTTTCAGCTAACCTGCTGAAGCTATGGGGAGCTGTTGGAGCTGTCTATACAGAGACGCCATTCAAGACAACCACCCCACCAAATTCAAGGTGACAAATGTGGATGATGAAGGGAACGAGCTGGGATCGGGGACTATGGAGCTCACCCAAACCGAGCTCATTCTGCACACACGAAAGCGTGATGCCATCCGGTGGCCGTACCTCTGTCTGCGCCGTTACGGATACGATTCCAACCTGTTCTCCTTCGAGAGCGGGAGGCGCTGTCAGACAGGACAGGGGATCTTCGCATTTAAGTGCTCTCGGGCAGAAGAGATCTTTAACCTGCTGCAGGAGCTGATGCAGTGCAACAGCATTAATGTGGTGGAGGAGCCCATGATCATGACCCGGCCTGGCCACACTCCGGAAATGGAGATGCCTCGAACCCCTCAAACACCCAACACTCCTGGGTTCCCAGTGCAGACGTTTCCTAATGGATACCCGGGGTACCCTATAAGCGCAGACTCATCACAGCCCTCCCTTACCGATGACCACAGACACAGCCTCATGGGGATGGACGACCAGACACATACGTATGTGAACACGGTCAGTATGGAGAGTGAGCTTTCGAGCCGACACTGTGTACGATCCCTGCCCGAGGTTCGGCCCCCTGCCTTCACCGAGGCATCCACCAAACCCAGCCaacccagcatgcactgctgCGGCATGGACGACTCTCATAAGGACCCTCAGCTCTTCCTCCAGCCAGGGGCTCAGGAGGTGAAGTTCATGCTGGGGCCGACGCCGGCACAGCGCCACCTGCTGGAGCGAGACAGAGACCGGCACTCCTCTCACCCTCTCCGAGCACCCGATGGCAGCTCAGAAACCGAGGGAGACGAGGCTCCGCCCCTTCACATGTGCAACACACATTCCTACCACCATTACCACCATCATATGCACCGGCACTCCAGCATGGAGCCTTGCCCGGGAAGCCAGCTAACATATGAGAACATTAATGGTCTTCGAGGGCCACGCAGGCAGAGGCTGAGCCCCAGCAGTGCCTCCCAGTCGCAGTCTGTGGGCtcgagcagcagcagcagcacagctGGAgaaacacacccacatacacacccacactctctgCCACTCTCCCATACACATGCCTCGGCATTGCCGCCGCAGGGCTACAGCGGGGGTCATCGCCGCTCTGCGCTGCTCAACTACGAGAACCTTCCGTCACTGCCACCAGTGTGGGAGTACCGTGCTCTTCAGCGTGATGAAGAAGAGGAgcaggatgaagatgaggaagatgatgagtatgaggaggaagaggaggaggacttTGATGAGTATGAATACTCAGAGGGGCCAGGAACCCCGAATGGATATCATCAGGAAAGTGGTGGCAGTGGTGGGATTCATCGCGATGCTCTGCAGAACTACGTCAACACAGAACAGATTCAGCCTCCCACCCATCTGCATCACGGATGCCCTCCTCATCCTCAGCCCTCTGAGAGGGGCGGCCGAGTTTTCAGTTTTGATTTCCGCCGGCATCGGGCAGGGCGTGGCACAGTTGGCAGTGCAGCCTGCGAGCAGCATGGCCGCCACCTGCCCCCTCCACCCTCTCGCCAGCTCAACTACATCCAGGTGGACTTGGAGGCTGGAGCCTCGAGTTGCCCAGGACACGGAGGGGGCAGCACTCAAGTGCCACAGAGACCGCCTCCAATGAAGCGTGGCATGGCTGCTGCCCCAGTAATGCCTCCCTCCCGCCGTGGTGAGTGTTATGCTGTGATCGACCTGCAGAAAACCGCAGCCATGTCCAATCTGCAGAAAGCCCTGCCTCGTGATGATGGCACGTCCCGAAAGACCCGCCACAACAGCACCGACCTGCCTCTGTGAGACAAAATGAGTGATAaagactgaaggaaaaaaagaatgctaTGGGTAAGAGTAGAAAACAAAGGAGCTCTGTGGTGTTACTACCCTCTCACCATTTAGTTGGAGTTTCCATCCTCACACTCATATTTTCAACACATTTGCACTTATGCCAGCTACTTCTTGTGGACAATAAGGCGGAAATGAATATACCAGCTGTACGTTATATAAATTCATGCAATTTTTAAAGGTGGCCCATAACTGATTTGGTGTCCAGTGACCATCAAATTGTAATCAAGCCCCTCCTTCTAAACTGAGCCTCAGAGTTATACCTTTACAGGTTTACaagaaaagtgtttaaaataatctaaaagGAAATGTTTGAATTCCGGATCACATCTGAAGCTGCTCTGTAAACAGCTGTATTTTCAGCTTAGGTAATACAGAGTACTACATGTTTAAAAGCTTATTTATTCACAACACTTTTACTCATTCATCTAGTCTATCATTAAATTTTATAGTATGTTACATTATAGAGCATaaaactttaactttttttgttttaaattaaacattcaatacatttaatttaacataatCTACACTTTGAAAGTTCTTTGTGTCTGAAAGTACAGATTAGGAAATAGTAAAAGACATTACAGTCTAAGAGATTACAGTCTTACTGCTGTTCCCACAACCCCAAAGTAATCACTCATAGGTGATTCACATTCAAGTGTTAATGAAGTGCAAATCCAAGactatgtatttatgtaaatctATGTTTTGGAAAAACTGTGCAAAGCATCATAGCCATGCATATGCAGAAGGAAGgactttcattatttttttataaaaaaaaaaagtcattccaTGAGCCTTGA
>XM_034310265.1
TAAAATACAATgagtttaattgtttaaagtACAGAAACCTTTAAGGAACTAGCAGCACCAGTCTTCCAGTAGATGATGGGCTAGAGGTCCTGACAGGTGATATTTGAACGTTAGAGTTAAGCAATAGAATATATTTATTCTCCACTATCAAGAGGCAGAGCCTGTTCACATTTGCAAGACAGAAATGTCATGTAAAGTAATTATACCTCAGATCCTGTGGGAGCCTGGGAATACAGCACAGATTGACTTCCATTATTGTATCTTAATCACAGCACGCTTTCtggaaaaaaaggacaaaattcTCAGAGGAATCTTTTTTCTTGGTTTGTCAGGAGATATGAAAGGTTTGTGCACTGGGACCTGCTGCTCATACCAGCACACCCCTGTTCCACCATGACCCCCAGCAGAGAATTCTGGGATTGACGGTAGCATCACTCCCACTGATGGCCTGCACCAGGTTTCAGCTAACCTGCTGAAGCTATGGGGAGCTGTTGGAGCTGTCTATACAGAGACGCCATTCAAGACAACCACCCCACCAAATTCAAGGTGACAAATGTGGATGATGAAGGGAACGAGCTGGGATCGGGGACTATGGAGCTCACCCAAACCGAGCTCATTCTGCACACACGAAAGCGTGATGCCATCCGGTGGCCGTACCTCTGTCTGCGCCGTTACGGATACGATTCCAACCTGTTCTCCTTCGAGAGCGGGAGGCGCTGTCAGACAGGACAGGGGATCTTCGCATTTAAGTGCTCTCGGGCAGAAGAGATCTTTAACCTGCTGCAGGAGCTGATGCAGTGCAACAGCATTAATGTGGTGGAGGAGCCCATGATCATGACCCGGCCTGGCCACACTCCGGAAATGGAGATGCCTCGAACCCCTCAAACACCCAACACTCCTGGGTTCCCAGTGCAGACGTTTCCTAATGGATACCCGGGGTACCCTATAAGCGCAGACTCATCACAGCCCTCCCTTACCGATGACCACAGACACAGCCTCATGGGGATGGACGACCAGACACATACGTATGTGAACACGGTCAGTATGGAGAGTGAGCTTTCGAGCCGACACTGTGTACGATCCCTGCCCGAGGTTCGGCCCCCTGCCTTCACCGAGGCATCCACCAAACCCAGCCaacccagcatgcactgctgCGGCATGGACGACTCTCATAAGGACCCTCAGCTCTTCCTCCAGCCAGGGGCTCAGGAGGTGAAGTTCATGCTGGGGCCGACGCCGGCACAGCGCCACCTGCTGGAGCGAGACAGAGACCGGCACTCCTCTCACCCTCTCCGAGCACCCGATGGCAGCTCAGAAACCGAGGGAGACGAGGCTCCGCCCCTTCACATGTGCAACACACATTCCTACCACCATTACCACCATCATATGCACCGGCACTCCAGCATGGAGCCTTGCCCGGGAAGCCAGCTAACATATGAGAACATTAATGGTCTTCGAGGGCCACGCAGGCAGAGGCTGAGCCCCAGCAGTGCCTCCCAGTCGCAGTCTGTGGGCtcgagcagcagcagcagcacagctGGAgaaacacacccacatacacacccacactctctgCCACTCTCCCATACACATGCCTCGGCATTGCCGCCGCAGGGCTACAGCGGGGGTCATCGCCGCTCTGCGCTGCTCAACTACGAGAACCTTCCGTCACTGCCACCAGTGTGGGAGTACCGTGCTCTTCAGCGTGATGAAGAAGAGGAgcaggatgaagatgaggaagatgatgagtatgaggaggaagaggaggaggacttTGATGAGTATGAATACTCAGAGGGGCCAGGAACCCCGAATGGATATCATCAGGAAAGTGGTGGCAGTGGTGGGATTCATCGCGATGCTCTGCAGAACTACGTCAACACAGAACAGATTCAGCCTCCCACCCATCTGCATCACGGATGCCCTCCTCATCCTCAGCCCTCTGAGAGGGGCGGCCGAGTTTTCAGTTTTGATTTCCGCCGGCATCGGGCAGGGCGTGGCACAGTTGGCAGTGCAGCCTGCGAGCAGCATGGCCGCCACCTGCCCCCTCCACCCTCTCGCCAGCTCAACTACATCCAGGTGGACTTGGAGGCTGGAGCCTCGAGTTGCCCAGGACACGGAGGGGGCAGCACTCAAGTGCCACAGAGACCGCCTCCAATGAAGCGTGGCATGGCTGCTGCCCCAGTAATGCCTCCCTCCCGCCGTGGTGAGTGTTATGCTGTGATCGACCTGCAGAAAACCGCAGCCATGTCCAATCTGCAGAAAGCCCTGCCTCGTGATGATGGCACGTCCCGAAAGACCCGCCACAACAGCACCGACCTGCCTCTGTGAGACAAAATGAGTGATAaagactgaaggaaaaaaagaatgctaTGGGTAAGAGTAGAAAACAAAGGAGCTCTGTGGTGTTACTACCCTCTCACCATTTAGTTGGAGTTTCCATCCTCACACTCATATTTTCAACACATTTGCACTTATGCCAGCTACTTCTTGTGGACAATAAGGCGGAAATGAATATACCAGCTGTACGTTATATAAATTCATGCAATTTTTAAAGGTGGCCCATAACTGATTTGGTGTCCAGTGACCATCAAATTGTAATCAAGCCCCTCCTTCTAAACTGAGCCTCAGAGTTATACCTTTACAGGTTTACaagaaaagtgtttaaaataatctaaaagGAAATGTTTGAATTCCGGATCACATCTGAAGCTGCTCTGTAAACAGCTGTATTTTCAGCTTAGGTAATACAGAGTACTACATGTTTAAAAGCTTATTTATTCACAACACTTTTACTCATTCATCTAGTCTATCATTAAATTTTATAGTATGTTACATTATAGAGCATaaaactttaactttttttgttttaaattaaacattcaatacatttaatttaacataatCTACACTTTGAAAGTTCTTTGTGTCTGAAAGTACAGATTAGGAAATAGTAAAAGACATTACAGTCTAAGAGATTACAGTCTTACTGCTGTTCCCACAACCCCAAAGTAATCACTCATAGGTGATTCACATTCAAGTGTTAATGAAGTGCAAATCCAAGactatgtatttatgtaaatctATGTTTTGGAAAAACTGTGCAAAGCATCATAGCCATGCATATGCAGAAGGAAGgactttcattatttttttataaaaaaaaaaagtcattccaTGAGCCTTGA

Function

symbol description
frs3 Predicted to enable fibroblast growth factor receptor binding activity and transmembrane receptor protein tyrosine kinase adaptor activity. Predicted to be involved in fibroblast growth factor receptor signaling pathway. Predicted to be located in membrane. Predicted to be active in cytoplasm. Is expressed in female organism. Orthologous to human FRS3 (fibroblast growth factor receptor substrate 3).

NR:

description
fibroblast growth factor receptor substrate 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026912883.2 True 3224 mRNA 0.51 8 16372782 16386220
XM_034310265.1 False 3188 mRNA 0.49 7 16372782 16379982

Neighbor

gene id symbol gene type direction distance location
eno1b eno1b,LOC108271510,LOC108440571,LOC107721178,LOC107568188,LOC107712086 coding downstream 18641 16346585 ~ 16354141 (-)
rereb LOC108271943,LOC108440553,LOC107721179,LOC107584416 coding downstream 26502 16327871 ~ 16346280 (-)
iho1 ccdc36 coding downstream 72876 16288171 ~ 16299906 (-)
slc26a6l LOC108271864,LOC108440479 coding downstream 91021 16271868 ~ 16281761 (-)
si:ch211-157b11.8 LOC108271679 coding downstream 147582 16221165 ~ 16225200 (-)
LOC113541386 cf125,uqcc2,LOC108440614,LOC107580205,LOC107667355,LOC106565356 coding upstream 8021 16394241 ~ 16398401 (-)
si:ch73-15b2.5 LOC108272055 coding upstream 14729 16400949 ~ 16406482 (-)
ddi2 ddi2,LOC102794950,LOC107721177,LOC107673502,LOC107667352 coding upstream 20356 16406576 ~ 16416819 (-)
prkcda LOC108271968,LOC108440644,LOC107582675,LOC103030273,LOC107667398,LOC107721176,LOC107673500,LOC107712078 coding upstream 33040 16419260 ~ 16430096 (-)
LOC113531657 LOC108272136 coding upstream 50620 16436840 ~ 16454566 (-)
G28508 NA non-coding downstream 13261 16358139 ~ 16359521 (-)
G28515 NA non-coding downstream 43361 16329108 ~ 16329421 (-)
G28385 NA non-coding downstream 106027 16266556 ~ 16266755 (-)
G28384 NA non-coding downstream 107622 16264924 ~ 16265160 (-)
G28383 NA non-coding downstream 108540 16263614 ~ 16264242 (-)
G28537 NA non-coding upstream 75882 16462102 ~ 16489915 (-)
G28779 NA non-coding upstream 184570 16570790 ~ 16571524 (-)
G29119 NA non-coding upstream 667868 17054088 ~ 17054656 (-)
G29167 LOC108272186 non-coding upstream 1007238 17393458 ~ 17394467 (-)
G29166 LOC108437688,LOC108272186,LOC103143039,LOC105011759,LOC105916686 non-coding upstream 1008546 17394766 ~ 17396199 (-)
eif4enif1 eif4enif1,LOC107568191,LOC107584417 other downstream 237067 16125830 ~ 16135715 (-)
oxtr oxtr,LOC107584509,LOC107673460,LOC107658098 other downstream 877573 15461950 ~ 15495209 (-)
G27925 cav3,LOC107749619,LOC107584510,LOC107577493 other downstream 911781 15456635 ~ 15461001 (-)
G27843 NA other downstream 1073763 15297309 ~ 15299019 (-)
pxmp4 pxmp4,LOC103464829 other downstream 1496792 14872948 ~ 14875990 (-)
G29158 NA other upstream 886735 17272955 ~ 17280173 (-)
si:dkey-44g17.6 LOC108271932,LOC107705318,LOC103038496,LOC107564436,LOC107555383,LOC105895117,LOC107678346 other upstream 1086110 17472330 ~ 17529315 (-)
G29263 NA other upstream 1562937 17949157 ~ 17949718 (-)
G29279 NA other upstream 1684767 18070987 ~ 18072909 (-)
zgc:153916 LOC108271870,LOC108413223,LOC107749976 other upstream 1762008 18148228 ~ 18195628 (-)

Expression


Co-expression Network