fkbp5 (fkbp5,LOC108271732,LOC108413698,LOC107712109,LOC107673486,LOC107667344)


Basic Information

Item Value
gene id fkbp5
gene name fkbp5,LOC108271732,LOC108413698,LOC107712109,LOC107673486,LOC107667344
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 16011998 ~ 16024469 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026913026.2
GAGCGGTGTAAAATAGCGCCGCTGGAACATTTAGTACTCACGGTGGAAGAAGGCGGGTCGGGCTTCCTCCCCGGCAGCAGcagcggcagcagcagcagcgcggCGCCCTTAAAGCGCCACGGAAACATGTTGCACTTGTCCACATTTGTGTAAAGTTCCTTGCGGATTATACAGTCAAGCGCATGAGACAGACCGGAAACAAAAGCGAAATATtgggAACAAGGGCCTGTCTTGAGGAGATGGCCAAATCTCAGGATGTGTGTCCAACTGCCCAGTCTCTTATTGCCCTATTCGCCTCACAGGGTTTAGACATCACTCCAAACAAAGACCGGGGAGTGTGCAAGATTGTGAAGCGGCATggtacagagggagagaagCCTATGATTGGGGACAAGGTGCATGTCCACTACACTGGAAAATTGCTTAATGGGAAGAAGTTTGACTCCAGTTTTGACCATAAGGAGCCTTTTGTCTTCAACGTAGGCAAAGGTCAGGTGATCAAAGCATGGGATATTGGTGTGTGCTCCATGCAGAAAGGAGAGGTGTGTCTGCTGATGTGTAAGCCAGAATATGCCTATGGCTCTGTTGGCAGCCCCCCAAAGATCCCTCCAAACTCTACACTATTGTTTGAGGTAGAGCTGTTGAGCTTTAGAGGGGAGGAGCTTACAGAGGATGGTGGAATCTTAAGGAGAATAAAGGTCAAAGGGGAAGGCTACAGTAATCCTAATGAAGGAGCCACAGTTCATgTGCACTTGGAGGGAAGGTGTTGTGGCCGTTTATTTGATTCACGGGACGTCACATTTGTGGTGGGAGAATCTGAGGACATGGGTGTTCCTCTGGGAGTGGATCGGGCCATGGAGAAGATGCAGAAAGGGGAATGTTGTCTACTATACTTAAAACCCAAATATGGCTATGGTAAAGAAGGAAAACCAGAATTGGACATTGGACCAAATGCAGAACTTTTGTATGAAGTGACACTCAAAGATTTTCAAAAGGCCAAAGAATCCTGGGAAATGGACTTGAGCGAGAAACTAGAGCAAGCAGTTTTGGTCAAACAGAAGGGAACACAGTACTTCAAGGCTGGGCGATACTACCAGGCTGTCATTCAGTATCAGCGTATTGTAACATGGCTGGAGATGGAGTGTGGGGTTGGAAAGGAGCAACAGCAGGCCATTCAGGCCCTCCTGCTTGTTGCCCATTTAAACCTGGCTCTGTGTTACTTACGCCTCCGGGAGTACTCTCAAACTGTGGAAAGCTGCAACAAGGTGATGGAGCTGGACTCTGCGAATGAGAAGGCGCTGTATCGGCGCGGAGAGGCTCATCTGTTGAGGAATGAATTCAGTCTGGCCCTAGTGGACTTCCGGCAAGTTCTTCAGGTCAATCCCACCAACCGTGCAGCCCATTGCCAGATCGCTGTCTGCCAACGCAAGATACGTGAACACCATGAGCGTGATAAAAAGATCTATGCCAACATGTTCCAGAGGTTTGCTGAACATGATGCCAAGGTGAGCCGATTAAAAAGGAGTAAAGAAGATTGTGGAGTGCTAGATCAAAACTGCAAGGCTATGAAGAGGCCACGGAGGAGTCAGGACTGCCCCTAATGGTCCACAGTCCTCCCCACAATGCCTGTAAAGCTGTGCAGATGCAGGCTGGTTCTGACTTTATGTACTTTGTGCTGAGTGCAGTACCGATACGCATGGACAGCCCCTTTTCACACACCGTGACATGACTGCTATCTCTCAGAACCCAAAAGACGAAGGCTCGGAAAAGACTAAGTATAAGAGCAAGGGTCTCTGAAGAAGTTATAAACTTAAATGGCATTCCAACAGACAAAATGCACACATGACCACTGGTATTCAACATCTAACCTCCATCACATACATCGTGATCCAAAAGTCTAAGACCACACTGAatatctgggattttttttacatttaaaattggagtaataaacagaaatattcaaaacaaacaaagtaagtgttcaatatcttgaatatttaacattaacatttaaataatatccctatttaaatgtaagccaatttgtgatattgaccatgttatctgctttgtacaaaagctcagattttcctcatgcatAATCTCTTCTGTTGAaccatgtgttcagacgacactctgatggattttatctaaaatggatcataaggttttgcacaaacttgtagagtccatgccaGCCTGAGTGCCcaatgtcattaaagcaaaaacggGACATaacaaatactaagaaactctgaaattcatgtcagTATTCCAAAGATTCTGCCCTTCATTCAAgctgttgtcaataatataattgtaATCACTGTatgaaattagaaaagaatgcaaaatataagtattttcactagtggtctcagactattggaccccactgtacatcTGAACCTAGCAAGGCATTTGTATAATGTAAAGATCACTGATAAGAATAAAAGTTGgtactgtataatgtg

Function

symbol description
fkbp5 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in chaperone-mediated protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm. Is expressed in gut; head; and regenerating fin. Human ortholog(s) of this gene implicated in major depressive disorder. Orthologous to human FKBP5 (FKBP prolyl isomerase 5).

NR:

description
peptidyl-prolyl cis-trans isomerase FKBP5-like

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0016020 membrane cellular_component
GO:0005528 FK506 binding molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09571 FKBP4_5; FK506-binding protein 4/5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026913026.2 True 2477 mRNA 0.45 11 16011998 16024469

Neighbor

gene id symbol gene type direction distance location
LOC113536636 LOC108271735,LOC108413697,LOC105889205 coding downstream 36014 15960164 ~ 15975984 (-)
LOC113536633 LOC108271735,LOC108413697 coding downstream 60511 15935781 ~ 15951487 (-)
LOC113536620 slc6a13l,LOC108271591,LOC108436256,LOC107673491,LOC107567081,LOC107712076,LOC107658051 coding downstream 101926 15899291 ~ 15910072 (-)
cadpsb cadpsb,LOC108271493,LOC108436257,LOC107673496 coding downstream 137280 15795801 ~ 15874718 (-)
cplane2 rsg1,LOC107673497,LOC107750284,LOC107712114 coding downstream 217222 15791568 ~ 15794776 (-)
entpd8 entpd8 coding upstream 23524 16047993 ~ 16056687 (-)
tgfa LOC108271731 coding upstream 49577 16074046 ~ 16083778 (-)
patz1 patz1 coding upstream 82360 16106829 ~ 16119848 (-)
c2h1orf74 c11h1orf74 coding upstream 148201 16172670 ~ 16175112 (-)
ruvbl1 ruvbl1,LOC107721190,LOC107568195,LOC107667375,LOC107673590 coding upstream 158048 16182517 ~ 16187880 (-)
G28232 NA non-coding downstream 78140 15929041 ~ 15933858 (-)
G28207 NA non-coding downstream 223845 15786853 ~ 15788153 (-)
G28191 NA non-coding downstream 286542 15720767 ~ 15725456 (-)
G28182 NA non-coding downstream 329954 15681570 ~ 15682044 (-)
G28173 NA non-coding downstream 395250 15615025 ~ 15616748 (-)
G28256 NA non-coding upstream 11364 16035833 ~ 16045675 (-)
G28258 NA non-coding upstream 13514 16037983 ~ 16039793 (-)
G28278 NA non-coding upstream 98260 16122729 ~ 16122949 (-)
G28325 NA non-coding upstream 156606 16181075 ~ 16181718 (-)
G28331 NA non-coding upstream 172105 16196574 ~ 16196867 (-)
oxtr oxtr,LOC107584509,LOC107673460,LOC107658098 other downstream 516789 15461950 ~ 15495209 (-)
G27925 cav3,LOC107749619,LOC107584510,LOC107577493 other downstream 550997 15456635 ~ 15461001 (-)
G27843 NA other downstream 712979 15297309 ~ 15299019 (-)
pxmp4 pxmp4,LOC103464829 other downstream 1136008 14872948 ~ 14875990 (-)
G27107 LOC108272123 other downstream 1953553 14050401 ~ 14058445 (-)
eif4enif1 eif4enif1,LOC107568191,LOC107584417 other upstream 101361 16125830 ~ 16135715 (-)
G29158 NA other upstream 1248486 17272955 ~ 17280173 (-)
si:dkey-44g17.6 LOC108271932,LOC107705318,LOC103038496,LOC107564436,LOC107555383,LOC105895117,LOC107678346 other upstream 1447861 17472330 ~ 17529315 (-)
G29263 NA other upstream 1924688 17949157 ~ 17949718 (-)
G29279 NA other upstream 2046518 18070987 ~ 18072909 (-)

Expression


Co-expression Network