mars1 (mars)


Basic Information

Item Value
gene id mars1
gene name mars
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 11522121 ~ 11536038 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026922382.2
GTAGTCCACGTGACACCGTGTGTCAGTCGGTGTACACAGCGCACCGGACCCGTGAAAACTACAGCATGCCGAGTTGCAGTTATCCGGTGCCAAGTTGCATCAGCTCATGAAAGATATAAAAGCCGGTTGAGTGGCGTGTTTTATGTGTCTGACTGAACTCTTCAGAGGAGTTGAGTTGTAGAGTCATTCCTGTAGGCTGACGGCGGGGGAACAGAAGAAGAGTTCAGATGAAGCTGTTTGTGAATGAAGGCAATCCGCAGTGTGTGAAAGTGCTGGCGGCGCTCGAGCACACCGCAGTGCAATGTGACGTGCAGCTGCTCAGCCATGAGGaaCGGGTGGTGTCCTTCCTGAGTCGCCCAGTCCTGCCTGCTGTGCTGTTGCCCAGCGGCCAGCAACTTTTCAGTGCTAATGCCATCTGCCAGTATCTGTTTGAGGTTGGTGGGAAAGAAATCACTGATGCTAGCAGGCAGTTACTGGAATGGGAAGCAACCGAATTGCAGcctgtGCTGCTTCAGGCCCTCCATGTGGCAGTGCTGCAGGGGAAGAGCAGCGAGGCTGGCACACTGCTGAAAAAACCTCTGAGCTGGCTGGAGCAGTGTCTGAGTGGAAAAAGCACACAGTTCCTAGCTGCAGAGACAGTCGAAGTGGCAGACATTGTCTTATGGGCAGCACTGTACCCCGTTCTGTCTGTCTCGGCTTTGGAAGCTGGTGAGCTGCGTTCTGTTCAAGGCTGGTTTGAGCGTGTAGGTCAGCTCCCAGCATGCACCACAGCAGTGCAAAAGATTCTGCCAGGCAAAGATCTTAAAGCTCTGAAGAATTTCCTTCAAAAGCAaccagctccacacacacagcaaaaggAAAACCTGCCCAGTGAGCTGGAAGGCGTGGAGCATGTGATGACTGCAGAGGAAATTGAGGTAGCTGCTCAGGCTTGGACTAAAGGACTGGCAGAGTGTCATGATGCCATAGAAAGGAAAAACCCTGTTTTACCTGAGGAAGGGATGCGTAATGTGCTGGTCACAAGTGCACTGCCGTATGTCAACAACGTGCCTCACCTAGGCAACATCATCGGCTGTGTGCTGAgcgctgatgtattctccagATATGGCCGTTTGCGTGGCTGGAACTTGCTTTATGTGTGCGGGACAGACGAGTACGGCACTGCAACAGAGAACAAGGCTCTTGAGGAGGGTCTAACGCCCCAGGAGATATGTGACAAATACTATGCTGTCCACACTGCCATCTACAAGTGGTTCCAGATCGACTTTGACTATTTCGGCCGAACCACCACTCAACAACAGACAGAAATTGCACAGAACATATTCTTTCGTTTACATGAGAGGGGATTTTTACACGAGGACACAGTGGAGCAGCTGTGCTGTGAGAACTGTCAGCGCTTCCTAGCTGACCGCTTTGTAGAGGGTGTGTGTCCTTATTGCAAATATCCTGAAGCCAGAGGGGACCAATGTGATAAGTGTGGCCGACTCATTAACGCTGTGGAGCTCAAGGATCctcagtgtaaggtgtgtgGACAGACTCCTGTGATTCGCACCTCTAAGCACTTGTTTCTTGACCTGCCCCAGCTGGAAGGCGAGTTGGAGAAGTGGCTGGAGCAGTCTTTGAATACAGGTGATTGGACCGCTAACGCTAAGCAAATCACCCGCTCATGGATAAGAGATGGTCTGAAGCCACGCTGCATCACACGAGATCTGAAGTGGGGGACACCTGTACCACTCCCAGAATATAGTGGAAAGGTGTTTTATGTCTGGTTCGACGCACCCATTGGCTACCTCTCAATAACTGCCAATTACACCAGTGAATGGGAGAAATGGTGGAAGAACCCACAACAGGTGGAGCTGTACAACTTCATGGCAAAAGACAATGTACCATTCCACAGTGTAGTTTTCCCCTGCTCTCTGCTCGGGGCACAGGACAACTACACACTCGTCAACCACCTCATCGCTACAGaATATTTGAACTATGAGGACACAAAGTTCTCAAAGAGCCGTGGTGTGGGAGTGTTTGGAGACATGGCTAAAGACACAGGCATTCCATCGGACGTTTGGCGTTTCTATCTTACCTACGTGAGACCTGAGGGCCAGGACTCCTCCTTCTCTTGGGCCGACCTGGCTCTGAAGAACAACTCCGAACTGCTCAATAACCTTGGCAATTTTATCAACAGgGCAGGCATGTTTGTGAATAAGTTCTTTAATGGCTGTGTGCCGGAGATTGTTCTGCAGGATGAAGACAAGCGTCTCATTGCTCAGGTGTCCTGGGAGCTCAAGCAGTACATCCAGTTGCTGGACAAAGTCAGGATTCGCGATGCCTTGAAGTGCATTCTCAATATCTCTCGTCATGGCAACCAGTATATTCAGAGTAATGAACCCTGGAAGAAGATCAAAGGAGGAGATGAGGACAGGAAACGTGCAGGCACAGTAACTGGCGTGTCGGTGAATGTGGCGTGTCTCCTGTCGGCCATGTTGGAGCCGTACATGCCCACAGTCAGTCGGACCATTCGTACCCAGCTGCAAGCTTCAGATAATTGTGCCAGTGCCATGCTGGGTGCTGAGGGATGTTTCCTCCGCAGCCTCCCAACCGGCCACCAAATCGGCACGGTCAGTCCTTTGTTCCAGAAGCTGGAGTCTGAGCAAATTGAGACACTAAGGAAGAAATTTGGAGGACAGCAGGGTCGCAGTGAGGAGACGAGCACAACGGAGACCAAGCCTCCCAATGCCGCAGAACCTATTGCTAGTcAAGGAAAGAAGtgatgagagaagagaaagaatgaggAGGAATGAGGATACCTTCATTTGGGTGTACCAGAAGAAGGTACATAGTGCAgggatatttttttctaaaagaatcattgtgaaagaaaatgtaactgtaatCAACTTGACATGACTGCTGCCAAGACAGAGCAAATTACAATgtacaacaataataaatccTTTAAATATAGTAAGGCAA

Function

symbol description
mars Enables microtubule binding activity and protein phosphatase 1 binding activity. Involved in several processes, including centrosome localization; kinetochore assembly; and mitotic spindle organization. Located in cytoplasm; nucleoplasm; and spindle. Colocalizes with kinetochore microtubule. Is expressed in several structures, including embryonic/larval optic lobe; extended germ band embryo; gonad; imaginal disc; and presumptive embryonic/larval system. Orthologous to human DLGAP5 (DLG associated protein 5).

NR:

description
methionine--tRNA ligase, cytoplasmic

GO:

id name namespace
GO:0006431 methionyl-tRNA aminoacylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004825 methionine-tRNA ligase activity molecular_function

KEGG:

id description
K01874 MARS, metG; methionyl-tRNA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026922382.2 True 2970 mRNA 0.50 21 11522121 11536038

Neighbor

gene id symbol gene type direction distance location
mbd6 mbd6 coding downstream 7491 11500588 ~ 11514630 (-)
soat2 LOC108272126,LOC108431801,LOC107734612,LOC107681296 coding downstream 80728 11428806 ~ 11441393 (-)
tox2 tox2,LOC107681298,LOC107666148,LOC106565275 coding downstream 353071 11069885 ~ 11169050 (-)
cbfa2t2 cbfa2t2,LOC107681292,LOC107740270,LOC107666150 coding downstream 510309 10986308 ~ 11011812 (-)
snrpb snrpb,LOC108272150 coding downstream 611637 10906195 ~ 10910484 (-)
LOC113531982 LOC108272195 coding upstream 50866 11586904 ~ 11612295 (-)
gli1 gli1 coding upstream 82933 11618971 ~ 11660989 (-)
rbm19 rbm19,LOC100304870,LOC107666967 coding upstream 446924 11982962 ~ 11994574 (-)
epha2a LOC108271798,LOC108427555 coding upstream 460925 11996963 ~ 12008819 (-)
LOC117596078 NA coding upstream 490690 12026728 ~ 12028660 (-)
G25484 NA non-coding downstream 21613 11499245 ~ 11500508 (-)
G25476 NA non-coding downstream 63931 11457974 ~ 11458190 (-)
G25320 NA non-coding downstream 192565 11326826 ~ 11329556 (-)
LOC117599085 NA non-coding downstream 259817 11257764 ~ 11262304 (-)
G25185 NA non-coding downstream 499480 11022439 ~ 11022641 (-)
G25553 NA non-coding upstream 161041 11697079 ~ 11698078 (-)
G25570 NA non-coding upstream 201529 11737567 ~ 11738741 (-)
G25575 r3hdm2 non-coding upstream 216449 11752487 ~ 11772290 (-)
G25723 NA non-coding upstream 401577 11937615 ~ 11937803 (-)
LOC117596184 NA non-coding upstream 676950 12212988 ~ 12214802 (-)
kif5ab kif5a other downstream 36652 11442471 ~ 11485469 (-)
itcha itcha,LOC108271999,LOC108431834,LOC107681287,LOC107666068 other downstream 587957 10916042 ~ 10934164 (-)
G24760 NA other downstream 1031826 10489293 ~ 10490295 (-)
G24516 NA other downstream 1653843 9863367 ~ 9868278 (-)
tnnt2b tnnt2,LOC108441587,LOC107696448,LOC107595452 other downstream 1796070 9715516 ~ 9726051 (-)
LOC113526127 LOC108272031,LOC108431803 other upstream 150707 11686745 ~ 11764135 (-)
slc5a8l slc5a8l,LOC108272176,LOC108427595,LOC107708058,LOC107685825,LOC107554166,LOC107666019,LOC107596840,LOC105007571,LOC107729725 other upstream 1957474 13493512 ~ 13502170 (-)
rps26l rps26,RPS26,rps26l,LOC107708153,LOC107554198 other upstream 2096224 13632262 ~ 13634744 (-)
fkbp11 fkbp11,LOC108271940,LOC108271564 other upstream 2104343 13640381 ~ 13647177 (-)
lhfpl4a lhfpl4,lhfpl4a,LOC107656118,LOC107586345,LOC107710167 other upstream 2328906 13864944 ~ 13907189 (-)

Expression


Co-expression Network