c2h1orf74 (c11h1orf74)


Basic Information

Item Value
gene id c2h1orf74
gene name c11h1orf74
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 16172670 ~ 16175112 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026931602.2
gTAGAATTTGTTAATATAATTTGTCAGATGTGAAGTGCATGCTCCGGTTTAGGATTGGCTGTGTTTCTTGAACGGTatgaaacttttattttgacgTTTCGTGTGAACAAACTTAAATGAGAAACGTGCGTTGTGCAGTTTAAAAACATGGCTGAATCACAAGGAAATATGTAATGTACTCTAGTGATTGTAGAAAAGTTGTAGTAGTGCTGCTCTACAGAGTGGGGTGTCATGACGGGTGAGATGAAACAGAAGTTGCCCCCTCTTAACTGTCTGGCTTATTTGTATCTATAGCCTAGTTATAGGGAGACAAAGGGAAAATGGTGGTCTCAGCAGATGTTTTCATCTCAGCAGCCCAGAGGTTTCTCTGTTgtgggaagaagaagaaacaaattCCTCATTCATCATGTCTTGATATGGCGGTGCAGATCATTGCTGTTGATCAGGGCCTTAAACCGGCTGTTCTGTACGACCTTAATGGTGCATGTGCAGAACAGATCCAGCGATATGTCAGCTCACTGCAGGAGGCTGGAGTACTGACCACAACACTCCGGATATTCTCCATCAATGGAAGTTGTCTTGTTGTGAACTCTAATCTGATGAAGGAACATTTGAGTGAAGTGCTTAAGAAAAAGAGCCTTCTCACTGTTGATGTGTGTCCATGGAAGGAGCAGCCGTCTCTGATTGTCATGGATAGTGGCACCAAGCGTATGGTCAAAGACATGCTGGACTTTTTTATGGACGAAGAGGACGAGCAGCCGTCAGTCAGTGTGGTGGGAGAGGAGCTGTATGACCGGTGGAACTTGTGCACACTTTTTGGGATCCTCCTGGGCTATCCTGCTTCATACTGGTTTGATCAAGTGCAGAGTTTTGAGAACTGTCTGAGTATGACCCCACTAGTGGTAAATAAAGTTTGGGTCTGCTGGCCAGTATGTGATACAAAGCACAGCAGTTGTCTTTACTCATTCAGTGTCCCTGAAGTGTTGTGGGCAGAAGTCGATACCTATATAAAAACCTGGGTGGAGCATTTGAGAAGCCGATTTTGCAAACAGACAGTTTTGACCGAACTCAGTATTTCAAAGGAAACAGTCACTTTGCCCACTGTAGCCCTGTGAGTGCTTGTGCTTTTATACGGTTTTAGTGCTCCAAAGCCTTGTTTGTGTTCACCACAGCCCTGATTTGGAGaaaactataacacacactttaaGACGGACTGgctgatttagatttttttttaagtgtaatgCACTACTGGCTTCATGCTGTGTTTCTCCTCAAAAGtcatttgggggaaaaagcattatagagtaaataatccacctcgttCATCTTCATTACATCTGTTACTGTGTTCCACTTGTGCTTTCTCGAccactgatgatgatgttatgTGTCAGCAACAtgggctgaaaaatatcagccccaATAAAAGGgcatttcactctgtgtaa

Function

NR:

description
PREDICTED: UPF0739 protein C1orf74 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026931602.2 True 1451 mRNA 0.43 2 16172670 16175112

Neighbor

gene id symbol gene type direction distance location
patz1 patz1 coding downstream 52822 16106829 ~ 16119848 (-)
tgfa LOC108271731 coding downstream 88892 16074046 ~ 16083778 (-)
entpd8 entpd8 coding downstream 115983 16047993 ~ 16056687 (-)
fkbp5 fkbp5,LOC108271732,LOC108413698,LOC107712109,LOC107673486,LOC107667344 coding downstream 148201 16011998 ~ 16024469 (-)
LOC113536636 LOC108271735,LOC108413697,LOC105889205 coding downstream 196686 15960164 ~ 15975984 (-)
ruvbl1 ruvbl1,LOC107721190,LOC107568195,LOC107667375,LOC107673590 coding upstream 7405 16182517 ~ 16187880 (-)
gata2b gata2 coding upstream 27276 16202388 ~ 16209962 (-)
si:ch211-157b11.8 LOC108271679 coding upstream 46053 16221165 ~ 16225200 (-)
slc26a6l LOC108271864,LOC108440479 coding upstream 96756 16271868 ~ 16281761 (-)
iho1 ccdc36 coding upstream 113059 16288171 ~ 16299906 (-)
G28278 NA non-coding downstream 49721 16122729 ~ 16122949 (-)
G28256 NA non-coding downstream 126995 16035833 ~ 16045675 (-)
G28258 NA non-coding downstream 132877 16037983 ~ 16039793 (-)
G28232 NA non-coding downstream 238812 15929041 ~ 15933858 (-)
G28207 NA non-coding downstream 384517 15786853 ~ 15788153 (-)
G28325 NA non-coding upstream 5963 16181075 ~ 16181718 (-)
G28331 NA non-coding upstream 21462 16196574 ~ 16196867 (-)
G28376 NA non-coding upstream 83746 16258858 ~ 16259163 (-)
G28375 p4htm non-coding upstream 84324 16259436 ~ 16260312 (-)
G28383 NA non-coding upstream 88502 16263614 ~ 16264242 (-)
eif4enif1 eif4enif1,LOC107568191,LOC107584417 other downstream 36955 16125830 ~ 16135715 (-)
oxtr oxtr,LOC107584509,LOC107673460,LOC107658098 other downstream 677461 15461950 ~ 15495209 (-)
G27925 cav3,LOC107749619,LOC107584510,LOC107577493 other downstream 711669 15456635 ~ 15461001 (-)
G27843 NA other downstream 873651 15297309 ~ 15299019 (-)
pxmp4 pxmp4,LOC103464829 other downstream 1296680 14872948 ~ 14875990 (-)
G29158 NA other upstream 1097843 17272955 ~ 17280173 (-)
si:dkey-44g17.6 LOC108271932,LOC107705318,LOC103038496,LOC107564436,LOC107555383,LOC105895117,LOC107678346 other upstream 1297218 17472330 ~ 17529315 (-)
G29263 NA other upstream 1774045 17949157 ~ 17949718 (-)
G29279 NA other upstream 1895875 18070987 ~ 18072909 (-)
zgc:153916 LOC108271870,LOC108413223,LOC107749976 other upstream 1973116 18148228 ~ 18195628 (-)

Expression


Co-expression Network