uap1 (uap1,LOC107724142,LOC107551035)


Basic Information

Item Value
gene id uap1
gene name uap1,LOC107724142,LOC107551035
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047596.1
NCBI id CM018542.1
chromosome length 35203048
location 23615454 ~ 23632013 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026933601.2
CTTCTTCGGTGCCACGTCAAATGACGGAAACGGGAGGCGGATTTGGCTCGGGGGCGGAGGAGCTGTAGTGGAGCTGTAGTAAAGCCGACGTAGCCGGGAGTCTGTCGCTAAAAGGGAAACGAGCTGAGAGTGAAATCATTAGTCTGCAACTACACATGAGATTTCACCCTGTGAACATGGAGATTGGTAAACTGGCTCAGAGGCTGGCTGAGGCTGGCCAGTCTCATCTGCTGCAGTTCTGGGACCAGCTGAATCCTGAGGAACAAGCAGAGCTGGCTCAAGAGCTCGAGGCTATGAACTTCCAGGAGATCAACACCTTCTTTAAGAAGGCCATGGAGACCAGTGGGCAGACCAAGCAGGAGAAGGTGGACAGCAGGATGGAGCCAGTGCCACGCGAGGTTCTGGGCAGCGTGACACGTGACCGCGAGTTTCTCAAAGAGTGGGAGGAAGAAGGTCTGCGATGTATATCTCAGAATAAAGTGGCAGTTCTGCTCCTGGCTGGAGGTCAGGGAACCAGACTGGGGGTCATGTACCCTAAAGGCATGTATGATGTCGGCCTGCCCTCGCACAAAACCCTGTTTCAGATCCAGGCCGAGCGCATCATCCGACTGGAGCAGCTCGCAAAGCAGCAGTACGGCACCGAGTGCTGCATCCCATGGTACATTATGACGAGCGGAAGAACAATGGAGTCCACTGAAAAGTTCTTTTCCAAACACAAGTACTTTGGCTTGAAGAAAGAGAACGTCATATTCTTTCAGCAAGGCATGCTTCCTGCCATGGACTTCAATGGCAAGATCATACTCGAAGGCAAAGGCAAACTCTCCATGGCACCAGACGGCAATGGAGGACTTTACAGAGCGCTAGGAGTGTATAAGATTGTGGAGGAcatggagagaagaggaatcAGCTACATCCACATCTACTGCGTGGACAACATCCTGGTGAAGGTGGCTGATCCTGCTTTTGTTGGATTTTGTGTGCGCAAGGGAGCGGACTGCGGTGCCAAGGTGGTGGAGAAAACCAATCCGACGGAGGcagtgggcgtggtctgtaaGGTTGATGGGCAGTACCAAGTAGTAGAGTACAGCGAAATCACAATTGTGACAGCTGAGAAGCGCAGCGTCGACGGTCGACTCATGTTTAACGCAGGCAACGTGGCCAATCATTTCTTCACCCTGTCCTTCCTCAAAGACGTCGTCAATACCCATGAGCCTCAGCTACAGCATCATGTGGCTCGGAAGAAAATCCCCTACGTGGACGCACGAGGTGAGCAGGTCAACCCCGAAAAACCCAACGGAATCAAGATGGAAAAATTTGTGTTCGACATCTTCCAGTTTGCCAAGAGGTTTGTGGTGTACGAGGTGCTGAGAGAGGATGAGTTTTCTCCGCTGAAGAATGCAGACAGTCAGGATGGGAAAGACAATCCCACAACTGCACGCCATGCCCTCATGTCCCTGCACCACCGCTGGATTCTCAACGCAGGTGGTCATTTCATCGATGAGAACGGAGCCCGCGTGCCTGCTATACCCAGAGATGGACCAGCAGGGGCACTCACACCTGATGGCAGCCAGAATCTGAAGGATGGAACTGACCTACCAATCAAATGTGAGATCTCTCCACTTGTGTCATATGGAGGAGAGGGACTGGAGAAACTAGTGCAGGGTAGAGAATTCCACCCAGCACTGATCATCAACGAGACTGGAATCCACGAGCATGTGAAAAACGGACTGTGAGCTGCGAGCTCAACATGTGAAAACCAACATGGAAGCCGTTTTCCCCTCCTTCCTCTATCTTCCTGTCAGGCTGGGAGAAAATGTGACATTCTAGTGCAATAAGATGAAGGAATAAGGCCTTCAGGGGCCTCATGTAATccaaatcaatttatttattttgcaaaacttatttttatataaatgcttGTTTTGTCCTAGAATAGGAACATGCATGGTAGTTAATAATTTATATGAATATGTTTACTATCAgaatgaatgtaatgtaatatgatgtaatcaGAATGGTACATGGGGTAATGTGTAGGATGATCAGCACCAGGGCATTTATCCAGCCTTTGTTTGTACCTTGAAATACATAGACATTTCTCAGGACACTGAGAAACTGAATTTCAGTAGCAGATGCTCTCTTTACACTGTACATTCTACAACTTCTGCCTTTTTAAACTATAACACTTTGCCCTCTGTAGCtccacacacattccacagtaTACTTTTGTCCTTAGACAATGAAGAACAGATAGAAATGAatatcattaaacattttatgaacACTTTATTTGATGAACATGTTCAAGAACAAATCAAACAGAACTGGGACAAATCAAATTTCTAAGAGAGATACTGTATCAATGTGGTCAATATTTTCAAACAGAGTAAAATAAATTCTTTCTAAACTCTTTATGAAAAGA
>XM_026933602.2
CTTCTTCGGTGCCACGTCAAATGACGGAAACGGGAGGCGGATTTGGCTCGGGGGCGGAGGAGCTGTAGTGGAGCTGTAGTAAAGCCGACGTAGCCGGGAGTCTGTCGCTAAAAGGGAAACGAGCTGAGAGTGAAATCATTAGTCTGCAACTACACATGAGATTTCACCCTGTGAACATGGAGATTGGTAAACTGGCTCAGAGGCTGGCTGAGGCTGGCCAGTCTCATCTGCTGCAGTTCTGGGACCAGCTGAATCCTGAGGAACAAGCAGAGCTGGCTCAAGAGCTCGAGGCTATGAACTTCCAGGAGATCAACACCTTCTTTAAGAAGGCCATGGAGACCAGTGGGCAGACCAAGCAGGAGAAGGTGGACAGCAGGATGGAGCCAGTGCCACGCGAGGTTCTGGGCAGCGTGACACGTGACCGCGAGTTTCTCAAAGAGTGGGAGGAAGAAGGTCTGCGATGTATATCTCAGAATAAAGTGGCAGTTCTGCTCCTGGCTGGAGGTCAGGGAACCAGACTGGGGGTCATGTACCCTAAAGGCATGTATGATGTCGGCCTGCCCTCGCACAAAACCCTGTTTCAGATCCAGGCCGAGCGCATCATCCGACTGGAGCAGCTCGCAAAGCAGCAGTACGGCACCGAGTGCTGCATCCCATGGTACATTATGACGAGCGGAAGAACAATGGAGTCCACTGAAAAGTTCTTTTCCAAACACAAGTACTTTGGCTTGAAGAAAGAGAACGTCATATTCTTTCAGCAAGGCATGCTTCCTGCCATGGACTTCAATGGCAAGATCATACTCGAAGGCAAAGGCAAACTCTCCATGGCACCAGACGGCAATGGAGGACTTTACAGAGCGCTAGGAGTGTATAAGATTGTGGAGGAcatggagagaagaggaatcAGCTACATCCACATCTACTGCGTGGACAACATCCTGGTGAAGGTGGCTGATCCTGCTTTTGTTGGATTTTGTGTGCGCAAGGGAGCGGACTGCGGTGCCAAGGTGGTGGAGAAAACCAATCCGACGGAGGcagtgggcgtggtctgtaaGGTTGATGGGCAGTACCAAGTAGTAGAGTACAGCGAAATCACAATTGTGACAGCTGAGAAGCGCAGCGTCGACGGTCGACTCATGTTTAACGCAGGCAACGTGGCCAATCATTTCTTCACCCTGTCCTTCCTCAAAGACGTCGTCAATACCCATGAGCCTCAGCTACAGCATCATGTGGCTCGGAAGAAAATCCCCTACGTGGACGCACGAGGTGAGCAGGTCAACCCCGAAAAACCCAACGGAATCAAGATGGAAAAATTTGTGTTCGACATCTTCCAGTTTGCCAAGAGGTTTGTGGTGTACGAGGTGCTGAGAGAGGATGAGTTTTCTCCGCTGAAGAATGCAGACAGTCAGGATGGGAAAGACAATCCCACAACTGCACGCCATGCCCTCATGTCCCTGCACCACCGCTGGATTCTCAACGCAGGTGGTCATTTCATCGATGAGAACGGAGCCCGCGTGCCTGCTATACCCAGTCTGAAGGATGGAACTGACCTACCAATCAAATGTGAGATCTCTCCACTTGTGTCATATGGAGGAGAGGGACTGGAGAAACTAGTGCAGGGTAGAGAATTCCACCCAGCACTGATCATCAACGAGACTGGAATCCACGAGCATGTGAAAAACGGACTGTGAGCTGCGAGCTCAACATGTGAAAACCAACATGGAAGCCGTTTTCCCCTCCTTCCTCTATCTTCCTGTCAGGCTGGGAGAAAATGTGACATTCTAGTGCAATAAGATGAAGGAATAAGGCCTTCAGGGGCCTCATGTAATccaaatcaatttatttattttgcaaaacttatttttatataaatgcttGTTTTGTCCTAGAATAGGAACATGCATGGTAGTTAATAATTTATATGAATATGTTTACTATCAgaatgaatgtaatgtaatatgatgtaatcaGAATGGTACATGGGGTAATGTGTAGGATGATCAGCACCAGGGCATTTATCCAGCCTTTGTTTGTACCTTGAAATACATAGACATTTCTCAGGACACTGAGAAACTGAATTTCAGTAGCAGATGCTCTCTTTACACTGTACATTCTACAACTTCTGCCTTTTTAAACTATAACACTTTGCCCTCTGTAGCtccacacacattccacagtaTACTTTTGTCCTTAGACAATGAAGAACAGATAGAAATGAatatcattaaacattttatgaacACTTTATTTGATGAACATGTTCAAGAACAAATCAAACAGAACTGGGACAAATCAAATTTCTAAGAGAGATACTGTATCAATGTGGTCAATATTTTCAAACAGAGTAAAATAAATTCTTTCTAAACTCTTTATGAAAAGA
>XR_003403848.2
GCTTCTTCGGTGCCACGTCAAATGACGGAAACGGGAGGCGGATTTGGCTCGGGGGCGGAGGAGCTGTAGTGGAGCTGTAGTAAAGCCGACGTAGCCGGGAGTCTGTCGCTAAAAGGGAAACGAGCTGAGAGTGAAATCATTAGTCTGCAACTACACATGAGATTTCACCCTGTGAACATGGAGATTGGTAAACTGGCTCAGAGGCTGGCTGAGGCTGGCCAGTCTCATCTGCTGCAGTTCTGGGACCAGCTGAATCCTGAGGAACAAGCAGAGCTGGCTCAAGAGCTCGAGGCTATGAACTTCCAGGAGATCAACACCTTCTTTAAGAAGGCCATGGAGACCAGTGGGCAGACCAAGCAGGAGAAGGTGGACAGCAGGATGGAGCCAGTGCCACGCGAGGTTCTGGGCAGCGTGACACGTGACCGCGAGTTTCTCAAAGAGTGGGAGGAAGAAGGTCTGCGATGTATATCTCAGAATAAAGTGGCAGTTCTGCTCCTGGCTGGAGGTCAGGGAACCAGACTGGGGGTCATGTACCCTAAAGGCATGTATGATGTCGGCCTGCCCTCGCACAAAACCCTGTTTCAGATCCAGGCCGAGCGCATCATCCGACTGGAGCAGCTCGCAAAGCAGCAGTACGGCACCGAGTGCTGCATCCCATGGTACATTATGACGAGCGGAAGAACAATGGAGTCCACTGAAAAGTTCTTTTCCAAACACAAGTACTTTGGCTTGAAGAAAGAGAACGTCATATTCTTTCAGCAAGGCATGCTTCCTGCCATGGACTTCAATGGCAAGATCATACTCGAAGGCAAAGGCAAACTCTCCATGGCACCAGACGGCAATGGAGGACTTTACAGAGCGCTAGGAGTGTATAAGATTGTGGAGGAcatggagagaagaggaatcAGCTACATCCACATCTACTGCGTGGACAACATCCTGGTGAAGGTGGCTGATCCTGCTTTTGTTGGATTTTGTGTGCGCAAGGGAGCGGACTGCGGTGCCAAGGTGGTGGAGAAAACCAATCCGACGGAGGcagtgggcgtggtctgtaaGGTTGATGGGCAGTACCAAGTAGTAGAGTACAGCGAAATCACAATTGTGACAGCTGAGAAGCGCAGCGTCGACGGTCGACTCATGTTTAACGCAGGCAACGTGGCCAATCATTTCTTCACCCTGTCCTTCCTCAAAGACGTCGTCAATACCCATGAGCCTCAGCTACAGCATCATGTGGCTCGGAAGAAAATCCCCTACGTGGACGCACGAGGTGAGCAGGTCAACCCCGAAAAACCCAACGGAATCAAGATGGAAAAATTTGTGTTCGACATCTTCCAGTTTGCCAAGAGGTTTGTGGTGTACGAGGTGCTGAGAGAGGATGAGTTTTCTCCGCTGAAGAATGCAGACAGTCAGGATGGGAAAGACAATCCCACAACTGCACGCCATGCCCTCATGTCCCTGCACCACCGCTGGATTCTCAACGCAGGTGGTCATTTCATCGATGAGAACGGAGCCCGCGTGCCTGCTATACCAGAGATGGACCAGCAGGGGCACTCACACCTGATGGCAGCCAGAATCTGAAGGATGGAACTGACCTACCAATCAAATGTGAGATCTCTCCACTTGTGTCATATGGAGGAGAGGGACTGGAGAAACTAGTGCAGGGTAGAGAATTCCACCCAGCACTGATCATCAACGAGACTGGAATCCACGAGCATGTGA

Function

symbol description
uap1 Predicted to enable UDP-N-acetylglucosamine diphosphorylase activity. Predicted to be involved in UDP-N-acetylglucosamine biosynthetic process. Is expressed in several structures, including EVL; ectoderm; hatching gland; pectoral fin; and polster. Orthologous to human UAP1 (UDP-N-acetylglucosamine pyrophosphorylase 1).

NR:

description
PREDICTED: UDP-N-acetylhexosamine pyrophosphorylase isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016779 nucleotidyltransferase activity molecular_function

KEGG:

id description
K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026933601.2 True 2422 mRNA 0.47 11 23615454 23632012
XM_026933602.2 False 2380 mRNA 0.47 10 23615454 23632012
XR_003403848.2 False 1719 misc_RNA 0.52 11 23616157 23632013

Neighbor

gene id symbol gene type direction distance location
ddr2a ddr2,ddr2a,LOC107594601,LOC107692417 coding downstream 3413 23573494 ~ 23612041 (-)
hsd17b7 hsd17b7,LOC107724130 coding downstream 42095 23564364 ~ 23573359 (-)
serbp1a serbp1,LOC108271890,LOC107594603,LOC107692416,LOC107758366 coding downstream 54664 23554250 ~ 23560790 (-)
LOC113538489 LOC108271594 coding downstream 112010 23496656 ~ 23503444 (-)
slc35d1a slc35d1,slc35d1a,LOC108272060,LOC108441641,LOC107724140,LOC107684099,LOC107758361 coding downstream 119963 23480023 ~ 23495491 (-)
nos1apa nos1ap,LOC108271954,LOC107551033,LOC107711121,LOC107692421 coding upstream 39005 23671018 ~ 23802064 (-)
rgs5a rgs5a,LOC108272128,LOC108441543,LOC107732440,LOC107564083,LOC107685321 coding upstream 220001 23852014 ~ 23866617 (-)
rgs16 LOC108271632,LOC108440142,LOC103040699 coding upstream 254754 23886767 ~ 23888466 (-)
rgs8 rgs8,LOC108441527,LOC108271678,LOC107711118,LOC107551030,LOC107732448,LOC107564081 coding upstream 270138 23902151 ~ 23919047 (-)
brinp3a.1 brinp3a.1,LOC108271581,LOC108441513,LOC107585174,LOC107711117,LOC107732447 coding upstream 445370 24077383 ~ 24130026 (-)
G32244 NA non-coding downstream 572692 23042531 ~ 23042762 (-)
LOC113538262 NA non-coding downstream 620265 22990447 ~ 22995189 (-)
G32157 NA non-coding downstream 829764 22711213 ~ 22785690 (-)
G31934 NA non-coding downstream 1046618 22565292 ~ 22568836 (-)
G31916 NA non-coding downstream 1054846 22538323 ~ 22560608 (-)
G32629 NA non-coding upstream 46769 23678782 ~ 23683686 (-)
G32686 NA non-coding upstream 388112 24020125 ~ 24020779 (-)
G32777 NA non-coding upstream 586480 24218493 ~ 24218937 (-)
G32781 NA non-coding upstream 627293 24259306 ~ 24259855 (-)
G32840 NA non-coding upstream 850650 24482663 ~ 24482990 (-)
dmrt2b LOC108271504 other downstream 389906 23222293 ~ 23225548 (-)
gpbp1l1 gpbp1l1,LOC107731630,LOC107551044,LOC107725200 other downstream 1021593 22582303 ~ 22593861 (-)
ccdc17 ccdc17 other downstream 1033511 22572432 ~ 22581943 (-)
raver2 raver2 other downstream 2084026 21449546 ~ 21531428 (-)
lepr lepr other downstream 2297631 21281364 ~ 21317823 (-)
nbeal1 nbeal1 other upstream 2048077 25680090 ~ 25738817 (-)
LOC113538393 NA other upstream 2268717 25900730 ~ 25907994 (-)
slc19a1 slc19a1 other upstream 2449136 26081149 ~ 26105675 (-)
ecrg4b c6h2orf40,LOC108273346,LOC108437667,LOC105893352 other upstream 2998816 26630829 ~ 26638538 (-)
si:ch73-23l24.1 LOC108437696,LOC108272416,LOC107559918,LOC107748583,LOC103032506,LOC107688887 other upstream 3007820 26639833 ~ 26649379 (-)

Expression


Co-expression Network