G274583


Basic Information

Item Value
gene id G274583
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047611.1
NCBI id CM018557.1
chromosome length 24879021
location 24403023 ~ 24491201 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU325323
tcacctttaaacacaaacactcacctttaaacactctcctttaacacaaacactctcctttaaacacaaacactctcctttaaacacaaacactctcctttaaacacaaacactctcctttaaacacaaacactctcctttaaacactctcctttaaacacaaacactcacctttaaacacaaacactcacctttaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU325323 True 200 lncRNA 0.35 2 24403023 24491201

Neighbor

gene id symbol gene type direction distance location
cwc27 cwc27,LOC107744252,LOC107713303 coding upstream 43900 24310031 ~ 24359123 (+)
cops4 cops4,csn4,LOC107685106,LOC107558694 coding upstream 106298 24276082 ~ 24296725 (+)
LOC113544070 kiaa1958,LOC107683261,LOC106568575 coding upstream 150955 24233760 ~ 24252068 (+)
ugcg ugcg,LOC107571241,LOC107558686,LOC107713309,LOC107658668 coding upstream 391973 23971438 ~ 24011050 (+)
ambp ambp coding upstream 557628 23835167 ~ 23845395 (+)
nln nln,LOC107743138 coding downstream 12662 24503863 ~ 24525223 (+)
apba1b LOC108276879 coding downstream 227528 24718729 ~ 24733547 (+)
G274457 lin54 non-coding upstream 141447 24257907 ~ 24261576 (+)
G274431 NA non-coding upstream 277810 24124736 ~ 24125213 (+)
G274289 NA non-coding upstream 292285 24107648 ~ 24110738 (+)
G274239 NA non-coding upstream 456516 23945616 ~ 23946507 (+)
G274193 NA non-coding upstream 533826 23868854 ~ 23869197 (+)
G274624 NA non-coding downstream 214 24491415 ~ 24491856 (+)
G274639 NA non-coding downstream 45929 24537130 ~ 24537736 (+)
G274646 NA non-coding downstream 91780 24582981 ~ 24583278 (+)
G274653 NA non-coding downstream 160549 24651750 ~ 24652197 (+)
G274662 NA non-coding downstream 190262 24681463 ~ 24682939 (+)
LOC117599389 NA other upstream 170204 24226154 ~ 24232819 (+)
hsdl2 hsdl2,LOC107558693,LOC107744249,LOC107658673,LOC107685110 other upstream 290170 24103073 ~ 24112853 (+)
cdc37l1 LOC108276758,LOC108433523 other upstream 462891 23937978 ~ 23940132 (+)
LOC113543986 rabgap1,LOC107686418,LOC107744072 other upstream 1016916 23281561 ~ 23386107 (+)
rc3h2 rc3h2,LOC108276736,LOC107595546,LOC106561687 other upstream 1128370 23244560 ~ 23274653 (+)
erbin erbin,erbb2ip other downstream 38777 24529978 ~ 24639642 (+)
zfand5b zfand5,LOC108277070,LOC108428885,LOC107742939,LOC107726558,LOC107705050,LOC107667265 other downstream 108661 24599862 ~ 24658701 (+)

Expression


Co-expression Network