G312171


Basic Information

Item Value
gene id G312171
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 92484 ~ 92915 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU369774
GTTTCCCAGAAGCTAAAATAACCCTATCCACGCTATTGCCACGGAGCGACGTGCCATTTCATGTGATCCATGGAAACAATGTGGAGCTCTCTAGAACCTGTGCACTTATTCCAAATGTTCACCTCGCTTACCATAAAGATATACGGCCTCATCATATGCACGACCATATACACCTCAACAAGCAAGGAGTACAACTTTTCTCGAGAATGCTGAAAAGCACAGCACTTGGAAACACCAGAAGTCTACCCCGCAAGAACAACTCCGAGCCAGAAAGAGGCATCCACCCTTCTCCAAAGTCCAGACAGGACTCAAGAGGTGGAGCTCCATCGCAGCAGAAGAGCTACGCAGCAGCAGTCCAGCAGCCACAACACCCTGCAGCGGCCGATCTCAACCAGATAAGACACCTACTCAACATCATCTGCTCCAAACTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU369774 True 432 TUCP 0.49 1 92484 92915

Neighbor

gene id symbol gene type direction distance location
kpna5 kpna5,LOC107552832,LOC107711738 coding upstream 60629 21279 ~ 31855 (+)
rwdd1 rwdd1,LOC107587776,LOC107704860,LOC107700695 coding upstream 84149 4175 ~ 8335 (+)
LOC117595741 LOC108280375,LOC108280376 coding downstream 125012 217927 ~ 543043 (+)
dop1a dopey1,LOC107587763,LOC107704948,LOC107597122 coding downstream 146363 239278 ~ 272041 (+)
me1 me1,LOC108280372,LOC107700750,LOC107587764,LOC107704946,LOC107716854,LOC106583951 coding downstream 244420 337335 ~ 388347 (+)
usp45 usp45 coding downstream 364226 457141 ~ 488658 (+)
LOC113543344 LOC108280269 coding downstream 412712 505627 ~ 522026 (+)
G312177 NA non-coding downstream 18856 111771 ~ 112458 (+)
G312179 NA non-coding downstream 19902 112817 ~ 113108 (+)
LOC113525271 NA non-coding downstream 23217 116132 ~ 121478 (+)
LOC113525279 NA non-coding downstream 67590 160505 ~ 164094 (+)
G312193 NA non-coding downstream 84928 177843 ~ 266537 (+)
G312172 NA other downstream 984 93899 ~ 94925 (+)
G312191 NA other downstream 81323 174238 ~ 175541 (+)
pnrc2 pnrc2 other downstream 96624 189539 ~ 193534 (+)
snap91a snap91,LOC108280370 other downstream 181907 274822 ~ 318962 (+)
atpv0e2 LOC108280382,LOC100691746,LOC107588449,LOC107551367,LOC107706116 other downstream 320704 413619 ~ 501389 (+)

Expression


Co-expression Network