G320867


Basic Information

Item Value
gene id G320867
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047615.1
NCBI id CM018561.1
chromosome length 21248730
location 15282360 ~ 15282740 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU380000
TGTCTTGACTGGTTGCAGCTAAATGCTCCACCAGGTCACAGCCAAACACCTTGTCTTTACTCCCACCTTTTCTTCGTCCTCTCTTCATTATGCACCGTTTCAACCACCACTTTTACATCCagacgtgtgtgcgtgtgtgtgtatgtgtttgctgTCGTGCTCTTAGTGATACGTGACACCTAAACCACTCATGATGATTATTGTGTGTTAGAATAAGCAGCGTTGTTTTTGTATCTGACCTCTAACAAATTTGAATTAGGTTTATCACACAGTTATGCTTCTGCTACATTCTGTATCACTACACTGCAAATCTCCTATTTCactcaaatctgattttattGAATGATTGTCTGTTGCCCTGGAGCTGGATGCTTGTGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU380000 True 381 lncRNA 0.42 1 15282360 15282740

Neighbor

gene id symbol gene type direction distance location
si:ch211-155e24.3 LOC108280454,LOC108232831,LOC103367105,LOC107383477 coding downstream 2394 15274921 ~ 15279966 (-)
LOC113533136 LOC108280455 coding downstream 10201 15269159 ~ 15272159 (-)
LOC113533134 LOC108280453 coding downstream 61484 15216728 ~ 15220876 (-)
vapal vapal,LOC108280766,LOC108427204,LOC107750204,LOC108432761,LOC107683769,LOC107684566 coding downstream 69338 15192241 ~ 15213022 (-)
LOC113533544 NA coding downstream 237276 15042706 ~ 15045084 (-)
LOC113533213 LOC108280248 coding upstream 21538 15304278 ~ 15306780 (-)
plekhj1 plekhj1,LOC107696566,LOC107750216,LOC107671816 coding upstream 46272 15329012 ~ 15332661 (-)
LOC113533539 LOC108280326 coding upstream 55997 15338737 ~ 15349506 (-)
onecut3b onecut3,LOC107724988,LOC107549809,LOC105906914,LOC107696512,LOC107552684,LOC105011560 coding upstream 180876 15463616 ~ 15489260 (-)
LOC113533480 LOC108280289,LOC108427160,LOC107724981,LOC108239455,LOC106526424,LOC106923029 coding upstream 311695 15594435 ~ 15648744 (-)
G320864 NA non-coding downstream 722 15281435 ~ 15281638 (-)
LOC113533367 NA non-coding downstream 177897 15095677 ~ 15104463 (-)
G320767 NA non-coding downstream 216580 15064126 ~ 15065780 (-)
G320640 NA non-coding downstream 622417 14571684 ~ 14659943 (-)
G320635 NA non-coding downstream 650189 14627785 ~ 14632171 (-)
G320868 NA non-coding upstream 895 15283635 ~ 15284425 (-)
G320870 NA non-coding upstream 2898 15285638 ~ 15285941 (-)
G320871 NA non-coding upstream 3344 15286084 ~ 15286877 (-)
G320880 NA non-coding upstream 21071 15303811 ~ 15304025 (-)
G320897 NA non-coding upstream 97395 15380135 ~ 15460416 (-)
LOC113533479 LOC108280451 other downstream 50780 15222778 ~ 15231580 (-)
theg NA other downstream 536873 14731734 ~ 14745487 (-)
LOC113533556 LOC108280202 other downstream 1602250 13665181 ~ 13680110 (-)
ccl25a NA other downstream 1666617 13612516 ~ 13615743 (-)
LOC113533649 LOC108280860,LOC108433106 other downstream 2354289 12908453 ~ 12928071 (-)
LOC113533563 NA other upstream 404342 15687082 ~ 15724356 (-)
G321462 NA other upstream 1074834 16357574 ~ 16367004 (-)
stk11 stk11 other upstream 1281968 16564708 ~ 16587816 (-)
trnal-uaa_3 NA other upstream 1690787 16973527 ~ 16973770 (-)
G322080 NA other upstream 2217325 17500065 ~ 17500832 (-)

Expression


Co-expression Network