G336041


Basic Information

Item Value
gene id G336041
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047617.1
NCBI id CM018563.1
chromosome length 20335669
location 354030 ~ 404443 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU397931
tatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtccgtctatctatatgtgtatgtattacTTTGAAATGTGCAGACACTGTGTCCAGCAGGTGCTTAGTTTGCCGGTCATGTAGAGTTTTTACCGGCTAACAGAAaccctgatatatatataattagttTCTCGTTTAGAGGACAATGCTCGCTAATTAGCTTGCGTTCCAAATTTAATCTTTCATGCTACTCTGGCGATTTGATGAAAACATGGCACTATCACAGTTTAACGTGTACATCACCTGTACATGAGAATAAAACATGTTCCCTGTGGGTGAAGAAGATACTCCCTCGGAGCTGGGTCGTTTCCAGGTGGACAGATGGAGTCACACAATGGGGAATGAGGCGTGGTAAATAAGGTGCAGGATTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU397931 True 411 lncRNA 0.42 2 354030 404443

Neighbor

gene id symbol gene type direction distance location
LOC117595883 NA coding upstream 592 352718 ~ 353438 (+)
LOC117595854 LOC108256799 coding upstream 7777 345309 ~ 346253 (+)
LOC113529052 LOC108256839 coding upstream 17355 335731 ~ 336675 (+)
LOC113529054 LOC108256799 coding upstream 23472 329614 ~ 330558 (+)
LOC117595853 LOC108256799,LOC108256839 coding upstream 70608 282493 ~ 283422 (+)
LOC117595878 LOC108259807 coding downstream 23875 428318 ~ 439616 (+)
LOC117595859 NA coding downstream 80773 485216 ~ 496318 (+)
LOC117595881 NA coding downstream 135245 539688 ~ 540721 (+)
LOC117595880 NA coding downstream 156835 561278 ~ 562318 (+)
LOC113528990 LOC108438405,LOC108438407,LOC108256992,LOC107727715,LOC107753917 coding downstream 255425 659868 ~ 664284 (+)
G336016 NA non-coding upstream 83147 213146 ~ 270883 (+)
G335897 LOC107737118 non-coding upstream 209559 127038 ~ 144471 (+)
G335896 NA non-coding upstream 211500 125194 ~ 142530 (+)
G335887 LOC108257212 non-coding upstream 300213 50894 ~ 53817 (+)
G335882 NA non-coding upstream 323882 29943 ~ 30148 (+)
G336078 NA non-coding downstream 35996 440439 ~ 440785 (+)
G336111 NA non-coding downstream 188873 593316 ~ 593539 (+)
G336126 NA non-coding downstream 209829 614272 ~ 620153 (+)
G336115 NA non-coding downstream 218289 622732 ~ 626949 (+)
G336141 NA non-coding downstream 227331 631774 ~ 632301 (+)
G336034 NA other upstream 66815 286849 ~ 287215 (+)
G336161 LOC108257052 other downstream 334926 739369 ~ 749674 (+)
G336172 NA other downstream 389674 794117 ~ 794695 (+)
G336213 NA other downstream 569226 973669 ~ 976321 (+)
mllt11 mllt11 other downstream 728512 1132955 ~ 1136124 (+)
G336334 NA other downstream 865366 1269809 ~ 1335574 (+)

Expression


Co-expression Network