G336167


Basic Information

Item Value
gene id G336167
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047617.1
NCBI id CM018563.1
chromosome length 20335669
location 768195 ~ 772828 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU398085
cactggtgtaatagaacaaacacacactggtgtaatagaacaaacacacactggtgtaacacaacaaacacacactggtgtaacacaacaaacacacactggtgtaatagaacaaacacacactggtgtaacacaacaaacacacactggtgtaatagaacaaacacacactggtgtaacacaacaaacacacactggtgtaacacaacaaacacacactggtgtaacagaacaaacacacactggtgtaacacaacaaacacacactggtgtaacacaacaaacacacactggtgtaacacaacaaacacacactggtgtaacacaacaaacacacactggtgtaacagaacaaacacacactggtgtaacacaacaaacacacactggtgtaacagaacaaacacacactggtgtaacacaacaaacacacactggtgtaacacaacaaacacacactggtgtaacagaacaaacacaaactggtgtaacagaacaaacacacactggtgtaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU398085 True 516 lncRNA 0.41 2 768195 772828

Neighbor

gene id symbol gene type direction distance location
LOC113528988 LOC108257047 coding upstream 56686 706407 ~ 711509 (+)
LOC113528992 LOC108257051,LOC108438410 coding upstream 74699 690756 ~ 693496 (+)
LOC113529047 LOC108256995,LOC108256994,LOC108438408,LOC107666325 coding upstream 82707 682280 ~ 685488 (+)
LOC113528991 LOC108256995,LOC108256994,LOC108438408,LOC108438412,LOC107666325,LOC107753917 coding upstream 89665 675097 ~ 678530 (+)
LOC113528990 LOC108438405,LOC108438407,LOC108256992,LOC107727715,LOC107753917 coding upstream 103911 659868 ~ 664284 (+)
si:dkey-89b17.4 LOC108257022,LOC108412773,LOC107563026,LOC107666327,LOC107753959,LOC107727719,LOC107665149 coding downstream 33477 806305 ~ 817243 (+)
utp18 utp18 coding downstream 120938 893766 ~ 906770 (+)
LOC113529000 NA coding downstream 137744 910572 ~ 950118 (+)
LOC117595860 NA coding downstream 176647 949475 ~ 951383 (+)
ube2m ube2m,ubc12,LOC107694448,LOC107570967,LOC107573069 coding downstream 251650 1024478 ~ 1033504 (+)
G336143 NA non-coding upstream 124057 643931 ~ 644138 (+)
G336141 NA non-coding upstream 135894 631774 ~ 632301 (+)
G336115 NA non-coding upstream 141246 622732 ~ 626949 (+)
G336126 NA non-coding upstream 148042 614272 ~ 620153 (+)
G336111 NA non-coding upstream 174656 593316 ~ 593539 (+)
LOC113528997 NA non-coding downstream 3047 775875 ~ 779026 (+)
G336202 NA non-coding downstream 116990 889818 ~ 906892 (+)
G336209 NA non-coding downstream 132411 905239 ~ 906488 (+)
G336241 LOC108257176 non-coding downstream 233404 1006232 ~ 1008093 (+)
G336243 NA non-coding downstream 243144 1015972 ~ 1016631 (+)
G336161 LOC108257052 other upstream 18521 739369 ~ 749674 (+)
G336034 NA other upstream 480980 286849 ~ 287215 (+)
G336172 NA other downstream 21289 794117 ~ 794695 (+)
G336213 NA other downstream 200841 973669 ~ 976321 (+)
mllt11 mllt11 other downstream 360127 1132955 ~ 1136124 (+)
G336334 NA other downstream 496981 1269809 ~ 1335574 (+)
G336350 cdk12 other downstream 552988 1325816 ~ 1327507 (+)

Expression


Co-expression Network