G336172


Basic Information

Item Value
gene id G336172
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047617.1
NCBI id CM018563.1
chromosome length 20335669
location 794117 ~ 794695 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU398091
AACACAGTGTTATTGTTCTTCCCTGAACACTACACgaccctcacacacaccgaGACACGACCAGAGTCTAAGGATCTACACAGAGGTGAACATCTGCACCAGGTTCTTACCCACAGCTCGTCTTTTCTGCTCCTGCCGGAGAGAGTCAGGGAGAGAGCCGGGGCCAGAGCCGGGGCCAGAGCCGGGGACAGAGCCGGGCCCGGAGGCGGCATGCTGGGGCTCGGGGTCCGCGGTGTCCCCGCGCTCTCTCTCTGCCGGTCTCGGGGACTGGATGGTGGCTCTGAGCCGCTGGTTCTCCTGCTCGTTTCGGGCCGTTTCCAGCAGCATGGAGCTCAGACTGGCCCCCACCGTGCCTGTGATCTCGGTCACGGCGAGCTGCACCACCTGCTCCAGCGCCGACTCCAGCTGGCCCTGGAAAAACGAGATGTACAGCGCGCCGTTcatcttctctcctcctctctcaccGCCTGCACGCGCAGCGCTGCTCGCATTCTCCTGCccggaaagaaaagaaatcagctCCGGAGAAGCAACACGGTGATGCCTTCCCTTTct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU398091 True 555 TUCP 0.62 2 794117 794695

Neighbor

gene id symbol gene type direction distance location
LOC113528988 LOC108257047 coding upstream 82608 706407 ~ 711509 (+)
LOC113528992 LOC108257051,LOC108438410 coding upstream 100621 690756 ~ 693496 (+)
LOC113529047 LOC108256995,LOC108256994,LOC108438408,LOC107666325 coding upstream 108629 682280 ~ 685488 (+)
LOC113528991 LOC108256995,LOC108256994,LOC108438408,LOC108438412,LOC107666325,LOC107753917 coding upstream 115587 675097 ~ 678530 (+)
LOC113528990 LOC108438405,LOC108438407,LOC108256992,LOC107727715,LOC107753917 coding upstream 129833 659868 ~ 664284 (+)
si:dkey-89b17.4 LOC108257022,LOC108412773,LOC107563026,LOC107666327,LOC107753959,LOC107727719,LOC107665149 coding downstream 11610 806305 ~ 817243 (+)
utp18 utp18 coding downstream 99071 893766 ~ 906770 (+)
LOC113529000 NA coding downstream 115877 910572 ~ 950118 (+)
LOC117595860 NA coding downstream 154780 949475 ~ 951383 (+)
ube2m ube2m,ubc12,LOC107694448,LOC107570967,LOC107573069 coding downstream 229783 1024478 ~ 1033504 (+)
LOC113528997 NA non-coding upstream 15091 775875 ~ 779026 (+)
G336167 NA non-coding upstream 21289 768195 ~ 772828 (+)
G336143 NA non-coding upstream 149979 643931 ~ 644138 (+)
G336141 NA non-coding upstream 161816 631774 ~ 632301 (+)
G336115 NA non-coding upstream 167168 622732 ~ 626949 (+)
G336202 NA non-coding downstream 95123 889818 ~ 906892 (+)
G336209 NA non-coding downstream 110544 905239 ~ 906488 (+)
G336241 LOC108257176 non-coding downstream 211537 1006232 ~ 1008093 (+)
G336243 NA non-coding downstream 221277 1015972 ~ 1016631 (+)
G336214 NA non-coding downstream 225544 1020239 ~ 1064155 (+)
G336161 LOC108257052 other upstream 44443 739369 ~ 749674 (+)
G336034 NA other upstream 506902 286849 ~ 287215 (+)
G336213 NA other downstream 178974 973669 ~ 976321 (+)
mllt11 mllt11 other downstream 338260 1132955 ~ 1136124 (+)
G336334 NA other downstream 475114 1269809 ~ 1335574 (+)
G336350 cdk12 other downstream 531121 1325816 ~ 1327507 (+)
G336433 parp10 other downstream 862622 1657317 ~ 1659459 (+)

Expression


Co-expression Network