G336433 (parp10)


Basic Information

Item Value
gene id G336433
gene name parp10
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047617.1
NCBI id CM018563.1
chromosome length 20335669
location 1657317 ~ 1659459 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU398432
TTTGAGTTTAATTTTggagttttaattttattttcttgcaCAAAATACCTCCAATACAACTTAAAATatagattaaaagaaaaaaagcaactcCAGGAACTCTTTATTCAGGTCACACAGAGTGAAAAATGCCTTCATCTTCCATcagcatgaagaaaaaaagagcttttaattcatttttttttaaaggtagaTCATTactgacctgcacaaatcagaTGATGAATATAAAACCAcataattagtttttaaaaattctattaaTCACAATCAGCTtcctaatataaaaaaataaacaatgtaaagTCTGAAGAAGGTTCACGATGAGTCACGATAGTTAAAACTGAACGTTATGTTTGGTGATAAAAAGGAGCTGAATATAAAGGAAGCGCGAGTGTCGCTTTGGAGCTGAATTTTAAACGCACTGATTAATGAATctaaaacctggttgcctctggcAGGAGGTTACAGCGTTAAACATGAAGTTAATACCTCGCTACGGTCGTCTCGGTCCTCAGAACTTTGAACTTTGATAAAAACTCAGTGCTGTAAACTGAAGATGACGTTGACGTGCACGAAGCTGAGAATGTAAACCAGATGAAAGTGTCACTGCTGGAGATCTTGCTGGTgttggggtgccaatacttctgaaAACAAATCCTGGAggggtttttgtgtgtttattaacacggtaattaaaataaaaactgtttattaaaCCTCCACATGATGAACTTTATCAGCTGCACGTGTGTTTTTTATCACGCATCGTAAAAGAGAAAATGGTTTATTACTTTATACGcgtttttaatcattaatctaATCCAGGAAACGTTTTCACGTCTCTTTAACTCTAACTTTGCTCTCTACTTCACttttatcagcatttatttatttattttaaaaaattatttaaaaaaattatttacttattcatttacttacttattttgcTTTACCCATAtttattcgtttatttattcaataaatgcaaacaaataaataatagttgtccatatttattaatatatttatgaatatttaaatcttaattatttattcattgtatAGTcacttcattattaatatttttttaaatgatttattttagaatttctACTAAATGCATGtaatctttaatttattttaatttttaaaatttttatttgtttatttctatgtAAAACACTGAGCTGCACTTTAATGTATGAAAAGTGCAACATAAATGAAGTTAATGATGaggatgattattattattatgtttgaaacacactcacacacacacacacacacacacacacacacacacacacacacacacacacacactcacacacacacacacacactcattcacttacacacacacgtacatactctctcacacacacaaactctcacactcacatacactgaCACTCAcatactctctcacacactcacactgacacaaactctcacacacacactcattcactcacactcacacacactcgctttaAGCTGTTTATTAGTATTTTGGACAGATAAAACACACTCTTTAGTGGCAGCTGATTGGTGAGACCACTGTGCAGTCGTGTGTGTAGGAGGTTAGAAGTCTGATTAATTCTCTGTAGTAAAGAAGGCAGATGTGTTGTTGAGCAGGAAGTGGACGGGTCACTCGGGAGGCTTCAGGCAGGTGATGAGGTACTGGGGATACGCCTGCGTGTCGTTGAAGATGACGAACAGACTGGGCTCCTTCACGTTGTCCACGACGCTGTGGAAGCGCATGGGCATGTCCGAGCCCTCTCTGAGTGGCGCCGCTCTCATGTCGTGCTTTCCCTGGGTGAAGTCTCCCGTCAGGACTCGCGCCACGAAGATGAACTTGTGTCCGTCGGCGTTGGGGGGAGAGTAGGTGTCGGACAGCGAGTAGGAGGATTTCACAGCGAAGTACACGCCTTGTCCGAACGCCGT

Function

symbol description
parp10 Predicted to enable NAD+ ADP-ribosyltransferase activity; protein ADP-ribosylase activity; and transcription corepressor activity. Predicted to be involved in negative regulation of gene expression; protein mono-ADP-ribosylation; and protein poly-ADP-ribosylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human PARP10 (poly(ADP-ribose) polymerase family member 10).

NR:

description
PREDICTED: MARVEL domain-containing protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU398432 True 1953 TUCP 0.37 3 1657317 1659459

Neighbor

gene id symbol gene type direction distance location
adck5 adck5 coding upstream 27321 1610614 ~ 1629996 (+)
lix1l lix1l,LOC107693252 coding upstream 48463 1596847 ~ 1608854 (+)
prcc prcc coding upstream 70855 1578998 ~ 1586462 (+)
mrpl24 mrpl24,LOC107559719,LOC107693309,LOC107669969 coding upstream 79161 1574337 ~ 1578156 (+)
mindy1 fam63a,LOC107693308,LOC107559718,LOC107669987,LOC106569905 coding upstream 112786 1530514 ~ 1544531 (+)
spag1a spag1,spag1a,LOC108438857,LOC107748364 coding downstream 23875 1683334 ~ 1701731 (+)
grhl2b grhl2,grhl2b,LOC107748368,LOC107672862,LOC107550099,LOC107552317,LOC107738316,LOC107698657 coding downstream 145211 1804670 ~ 1842048 (+)
psmg2 psmg2 coding downstream 223986 1883445 ~ 1891699 (+)
seh1l seh1l,LOC107668717,LOC107746927 coding downstream 261476 1920935 ~ 1932700 (+)
rnmt rnmt,LOC107746930 coding downstream 332355 1991814 ~ 2003334 (+)
G336275 NA non-coding upstream 69023 1586247 ~ 1588294 (+)
G336406 NA non-coding upstream 77017 1579795 ~ 1580300 (+)
G336267 NA non-coding upstream 106117 1549855 ~ 1551200 (+)
G336391 NA non-coding upstream 108087 1548991 ~ 1549230 (+)
G336283 NA non-coding upstream 108425 1548665 ~ 1548892 (+)
G336256 pabpc1,LOC107672855 non-coding downstream 78704 1738163 ~ 1741007 (+)
G336261 NA non-coding downstream 96726 1756185 ~ 1757404 (+)
G336481 NA non-coding downstream 161673 1821132 ~ 1842536 (+)
G336482 NA non-coding downstream 183130 1842589 ~ 1842970 (+)
G336849 fam210a,LOC107675659,LOC107754921,LOC107566562,LOC107668710 non-coding downstream 306517 1965976 ~ 1984496 (+)
G336334 NA other upstream 321743 1269809 ~ 1335574 (+)
G336350 cdk12 other upstream 329810 1325816 ~ 1327507 (+)
mllt11 mllt11 other upstream 521193 1132955 ~ 1136124 (+)
G336213 NA other upstream 680996 973669 ~ 976321 (+)
G336172 NA other upstream 862622 794117 ~ 794695 (+)
polr2k NA other downstream 15581 1675040 ~ 1680352 (+)
G336822 ldlrad4 other downstream 216815 1876274 ~ 1945866 (+)
LOC117595892 LOC108257284,LOC108257282,LOC108257281,LOC108257289,LOC108257310,LOC108272567,LOC108261104,LOC108280065,LOC108272472,LOC108261175,LOC108279530,LOC100526730,LOC108257326,LOC108257286,LOC108261265 other downstream 526433 2185892 ~ 2351749 (+)
LOC113546301 LOC108257282,LOC108257281,LOC108257284,LOC108257326,LOC108257289,LOC108257286,LOC108257310 other downstream 642686 2302145 ~ 2340261 (+)
LOC113546300 LOC108280069,LOC108261210,LOC108257281,LOC108257282,LOC108257284,LOC108257326,LOC108257286,LOC108257289 other downstream 698657 2358116 ~ 2392537 (+)

Expression


Co-expression Network