mturn (mturn,LOC107559763,LOC107572558)


Basic Information

Item Value
gene id mturn
gene name mturn,LOC107559763,LOC107572558
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047617.1
NCBI id CM018563.1
chromosome length 20335669
location 6604605 ~ 6616023 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU401948
ATTTCTCTCAACGAGAACGCGCGAAGTGAACGGAGGCCAGGGCCAAGATGCGACGGTGCTAGCGTCGAAATCTAGCTCCCATCACACACGCCCCCATCcccccctaaaaaaaaaagaaaagaaataaaagcaccaTGCGGATGATTTAAGGAGGCTCGGAGCGCTGAGATCTGTGCAGTAGATATTGTTTTGCAGCTTGAGCTTTGCTGCGCAGGTGCGCCGTTACGCTGCGGCAGGATGGAGTTCAAGCAGCTGGTGGACGCGGCGGAAAAATGGTGCTCAGGAAACCCGTTCGAGCTGATCTTCGCCGAGGAGGTGGACGAGCGCCGGATGGACTTCTACGCCGAGCCTGGCATTTCGTTTTACGTGCTCTGCCCCGACAACATGACAGGAGGTACCGACACTTTTcatgtgTGGAGTGAGAGTGAGGACTGCCTGCCATTCCTGCAGCTGGCACAGGACTACATCTCCTCCTGCGGACACAAAACCCTGCTGGAGGTCCTTGACAAAGTCTTCAGATCCTTCAGACCTCTCCTGGGTCTTCCAGACATTGATGACGATACGTACGAGCAGTACCATGGAGACGTGGAGGAGGAAGCAGAGACGGACCATCAGCAGATGGGTGTTAGCCAATAATATGCTTATTGAGGTGGATCGACCTTCCACGGGCCAGAGTGTTGCTtcattccctctctttttttccttcttccaagCCATCTTCACATTTCTACTGGTTTATGATATGCACTATCCCTCTGTcttacacacttgcacacatgcACCACGGCTTGTTATAATGCACGATTCCACCCTTTaccatgttggaaaaaaaaaaaaaaacattctcgGTAGACCTCCCGTGTCCttcttgttttatttagcaagcccctgctgaaaaaaaaaatatggaaaccATTTCAGGTTTCTGTTGGTTCCTGTGTAGTGGTATTTTGTATAATGGGTTGGTATCACAGTTTAATGGGTCCTAATGGTTTAACAGGTAATGCGTGACTGATTTTAGACGTGCTTAATGGTTTTCTAATGGGATTCAAGAGTCTAATGGTCTCTGATGGTAGCATTATTGTAATAAGCTGTGGTTCAGTTGCTTAATGGACCTAGTAGATTTGTTATATAATCCTGCATTTCAGGCTGTGTgtaagaaaacaggaaaacatttATATGTAGTGTTTAAGCTTATCTAGTTCAAtctgaaaaatatttcattcagtTAGTATAAATATTAGAGATGGcacgataccactttttcttttccaataccGATACTTACAccgaaaccttgagtatcagatGATATCGATACCCATctggtatttttttctttaaaaactactatggtttaattttttttaactgaaacacttcactttaaaaaatactttaaaacttgtaaaaatataggaaaaacttttttcctcttttggctgctcccatattcggggtcaccacagcggatcacccATCCGCATATTTTGATTCCAGCACAAGTTTTATGCCAGATgtccttcctgacacaaccctccccatttccaggcttgggaccagcagtGAGAGTACACTGGCTCGTGCAaccctccagtggctggggttggttccctgaccaggaatcaaacccagacTGCAGTGATGAGAGCACCACATGCTAGCCACTAGTCCACCAGGGAACCTTAAAAATTTAGGAAAAACACGTAGCTAAAACAGGACTTACACAAAACCACAGCTCAGCTAGACTTTTTCCCcacaaaaatcacatacattgcAAATAGAATTGATGTTCTTTTAATGTAATaactaaatataataaagtataaagcataaatataatgaaatcaatcctaacaaaaaagtctttatttgtaaacatttccaCTTTCAAAAAAATCTTTGACAAATCCAATTCCAGGATCagatcgatttttttttttttttttcccaatatcTGATCCACCAGATCAGATCAGTGCATTCTCTGATAAATATACCCTGTATATATACTGGATCTGAAGCTGAATCAATATCTAATACACACTTGGGAACCATCAAAACCATTAGAGCTTGTGAAATTGTTTAATGGAAACCACCAGGTTAATCCCATTAGGaagtaaacaaatatttatgtttttttgagCAAGGTGGATTATGAACCATACTGCTATTACCATTAAACACAAATTCATTCATAGAGTTCTCCTGAATATGAGACATAGCTAAAATAGCTTAATATTTCCCCAAAATTGTGGGAATAGTTAAACAGGTACTTTAAATTTAGGCTCTCATCTTCACAATGATGAATAGAGCTTGTCTTTCTGAATGTATGTACTTAGAAAGTCATGATTGATTTTCTGGTGAATAGGTGAAGAGGTGTTGTAATGTTGTAACATGTGAGACCAATCAGTGATTTCAAATGTCAGAGGTGATTTATCACACGCTTTGGAATACTCATCATCGGCTTTGTCTTTACATCTCAATATCCTTGATCATATGGCCTTGGATTGAATAGGAATAGTGATCAGTAAAGCTCTCAGCCTGCGATACTTAATGCATAATAGCCCTAGATCAGAGATAGCGTGATTgcattttcagctttctgtAAAGACAAGCCTGCGTTTACACTTATGCATCGTGGttacttttctttttggttttcAATAGTCTTTGATTGTATTAAACTATAGCCTACTTCAGGCATGTTTTCACACAAATCATGGCTAATTATAGACTTCCTCCATGATGTTTTCCTCCCAGAATACGCAAAAGTAGAAGCCTGAGTTGAGCTTTAATGTATGAAGTACAGTAAGTGTGAACATGTTGATCTGAAGCAGCTTCCTCTTTTTTCATCCTCTGGTGCTGACTGAGGAAAATATGATCCTCAACCAGCACTCAGTCTTCATGATTAAAGGCACTGAACTGACTGAAGTCTGACACACCCCACAGCAAATTCTTTCCGGACCGCTTGACCAATGTAAACAGGTTAGCAGGACCAGCAGGCACGTCACATGTTGTTCCAGGATATGAAGAAAGCTGATATGATCCTGCTGACTTCATATGTTTAGTGCCCACCTAATGCTGCCATCAAACCCCTGTATctcccacacactcactgcTTCCATGCTGTCTTCCTCAGCATTAAGTCATCCACATGTACTGAAGTCTGGTGTAAGATCAATCAAAGCTACTCTTCTATGCTCATATTTATTTGATCGTCCAGCTTTAGCACTCTGCAAgcttttgtatatttttcccACCAGTGCAAACCTCTGGGTATTTACCCCATTAAAACAACTAT
>XM_026929411.2
CATCGCGCCGGTCGTGGCGTGAACGCGCAACTCCGGGAGACGCAGTCGGTTTATTTCTCTCAACGAGAACGCGCGAAGTGAACGGAGGCCAGGGCCAAGATGCGACGGTGCTAGCGTCGAAATCTAGCTCCCATCACACACGCCCCCATCcccccctaaaaaaaaaagaaaagaaataaaagcaccaTGCGGATGATTTAAGGAGGCTCGGAGCGCTGAGATCTGTGCAGTAGATATTGTTTTGCAGCTTGAGCTTTGCTGCGCAGGTGCGCCGTTACGCTGCGGCAGGATGGAGTTCAAGCAGCTGGTGGACGCGGCGGAAAAATGGTGCTCAGGAAACCCGTTCGAGCTGATCTTCGCCGAGGAGGTGGACGAGCGCCGGATGGACTTCTACGCCGAGCCTGGCATTTCGTTTTACGTGCTCTGCCCCGACAACATGACAGGAGGTACCGACACTTTTcatgtgTGGAGTGAGAGTGAGGACTGCCTGCCATTCCTGCAGCTGGCACAGGACTACATCTCCTCCTGCGGACACAAAACCCTGCTGGAGGTCCTTGACAAAGTCTTCAGATCCTTCAGACCTCTCCTGGGTCTTCCAGACATTGATGACGATACGTACGAGCAGTACCATGGAGACGTGGAGGAGGAAGCAGAGACGGACCATCAGCAGATGGGTGTTAGCCAATAATATGCTTATTGAGGTGGATCGACCTTCCACGGGCCAGAGTGTTGCTtcattccctctctttttttccttcttccaagCCATCTTCACATTTCTACTGGTTTATGATATGCACTATCCCTCTGTcttacacacttgcacacatgcACCACGGCTTGTTATAATGCACGATTCCACCCTTTaccatgttggaaaaaaaaaaaaaaacattctcgGTAGACCTCCCGTGTCCttcttgttttatttagcaagcccctgctgaaaaaaaaaatatggaaaccATTTCAGGTTTCTGTTGGTTCCTGTGTAGTGGTATTTTGTATAATGGGTTGGTATCACAGTTTAATGGGTCCTAATGGTTTAACAGGTAATGCGTGACTGATTTTAGACGTGCTTAATGGTTTTCTAATGGGATTCAAGAGTCTAATGGTCTCTGATGGTAGCATTATTGTAATAAGCTGTGGTTCAGTTGCTTAATGGACCTAGTAGATTTGTTATATAATCCTGCATTTCAGGCTGTGTgtaagaaaacaggaaaacatttATATGTAGTGTTTAAGCTTATCTAGTTCAAtctgaaaaatatttcattcagtTAGTATAAATATTAGAGATGGcacgataccactttttcttttccaataccGATACTTACAccgaaaccttgagtatcagatGATATCGATACCCATctggtatttttttctttaaaaactactatggtttaattttttttaactgaaacacttcactttaaaaaatactttaaaacttgtaaaaatataggaaaaacttttttcctcttttggctgctcccatattcggggtcaccacagcggatcacccATCCGCATATTTTGATTCCAGCACAAGTTTTATGCCAGATgtccttcctgacacaaccctccccatttccaggcttgggaccagcagtGAGAGTACACTGGCTCGTGCAaccctccagtggctggggttggttccctgaccaggaatcaaacccagacTGCAGTGATGAGAGCACCACATGCTAGCCACTAGTCCACCAGGGAACCTTAAAAATTTAGGAAAAACACGTAGCTAAAACAGGACTTACACAAAACCACAGCTCAGCTAGACTTTTTCCCcacaaaaatcacatacattgcAAATAGAATTGATGTTCTTTTAATGTAATaactaaatataataaagtataaagcataaatataatgaaatcaatcctaacaaaaaagtctttatttgtaaacatttccaCTTTCAAAAAAATCTTTGACAAATCCAATTCCAGGATCagatcgatttttttttttttttttcccaatatcTGATCCACCAGATCAGATCAGTGCATTCTCTGATAAATATACCCTGTATATATACTGGATCTGAAGCTGAATCAATATCTAATACACACTTGGGAACCATCAAAACCATTAGAGCTTGTGAAATTGTTTAATGGAAACCACCAGGTTAATCCCATTAGGaagtaaacaaatatttatgtttttttgagCAAGGTGGATTATGAACCATACTGCTATTACCATTAAACACAAATTCATTCATAGAGTTCTCCTGAATATGAGACATAGCTAAAATAGCTTAATATTTCCCCAAAATTGTGGGAATAGTTAAACAGGTACTTTAAATTTAGGCTCTCATCTTCACAATGATGAATAGAGCTTGTCTTTCTGAATGTATGTACTTAGAAAGTCATGATTGATTTTCTGGTGAATAGGTGAAGAGGTGTTGTAATGTTGTAACATGTGAGACCAATCAGTGATTTCAAATGTCAGAGGTGATTTATCACACGCTTTGGAATACTCATCATCGGCTTTGTCTTTACATCTCAATATCCTTGATCATATGGCCTTGGATTGAATAGGAATAGTGATCAGTAAAGCTCTCAGCCTGCGATACTTAATGCATAATAGCCCTAGATCAGAGATAGCGTGATTgcattttcagctttctgtAAAGACAAGCCTGCGTTTACACTTATGCATCGTGGttacttttctttttggttttcAATAGTCTTTGATTGTATTAAACTATAGCCTACTTCAGGCATGTTTTCACACAAATCATGGCTAATTATAGACTTCCTCCATGATGTTTTCCTCCCAGAATACGCAAAAGTAGAAGCCTGAGTTGAGCTTTAATGTATGAAGTACAGTAAGTGTGAACATGTTGATCTGAAGCAGCTTCCTCTTTTTTCATCCTCTGGTGCTGACTGAGGAAAATATGATCCTCAACCAGCACTCAGTCTTCATGATTAAAGGCACTGAACTGACTGAAGTCTGACACACCCCACAGCAAATTCTTTCCGGACCGCTTGACCAATGTAAACAGGTTAGCAGGACCAGCAGGCACGTCACATGTTGTTCCAGGATATGAAGAAAGCTGATATGATCCTGCTGACTTCATATGTTTAGTGCCCACCTAATGCTGCCATCAAACCCCTGTATctcccacacactcactgcTTCCATGCTGTCTTCCTCAGCATTAAGTCATCCACATGTACTGAAGTCTGGTGTAAGATCAATCAAAGCTACTCTTCTATGCTCATATTTATTTGATCGTCCAGCTTTAGCACTCTGCAAgcttttgtatatttttcccACCAGTGCAAACCTCTGGGTATTTACCCCATTAAAACAACTATCACCATTTTAATGACTTTGAGTTTTAACTAAAGTATGCTTAAAGACGTAATTTTATAATTTGTCTTGTTTTATCTCATGCTTTGTTATCTGATTTGTTTCGTCCTCAAGTTTGTGTATGTTCCTAAATTAAACCATGTGGAGGTGACGTTC

Function

symbol description
mturn Predicted to be involved in positive regulation of megakaryocyte differentiation. Predicted to be located in cytoplasm. Orthologous to human MTURN (maturin, neural progenitor differentiation regulator homolog).

NR:

description
maturin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU401948 False 3304 TUCP 0.41 3 6604657 6615872
XM_026929411.2 True 3507 mRNA 0.41 3 6604605 6616023

Neighbor

gene id symbol gene type direction distance location
LOC113536295 ankrd28,LOC108256911,LOC108441435,LOC107745379,LOC107596646 coding upstream 33347 6528408 ~ 6571258 (+)
snx13 snx13 coding upstream 80479 6477323 ~ 6524126 (+)
twist1a twist1,twist1a,LOC108257132,LOC107755947,LOC107709721,LOC107667574 coding upstream 218925 6384201 ~ 6385680 (+)
LOC113536247 ferd3l,LOC102791589 coding upstream 223268 6380160 ~ 6381337 (+)
polr1f twistnb coding upstream 253876 6345471 ~ 6350729 (+)
znrf2a znrf2,LOC105939633,LOC106531196 coding downstream 5193 6621216 ~ 6634193 (+)
clptm1l clptm1l,LOC107655116,LOC107694764 coding downstream 37198 6653221 ~ 6662882 (+)
rplp1 rplp1 coding downstream 48070 6664093 ~ 6666353 (+)
LOC113536346 tuba4l,LOC108256914,LOC108437766,LOC107669576,LOC107564211 coding downstream 157296 6773319 ~ 6775535 (+)
cndp2 cndp2,LOC107748690,LOC107696911,LOC107739559,LOC107688323 coding downstream 379290 6995313 ~ 7008911 (+)
G339279 NA non-coding upstream 77511 6526395 ~ 6527094 (+)
G339275 NA non-coding upstream 78288 6474482 ~ 6526317 (+)
LOC117595844 NA non-coding upstream 106862 6494601 ~ 6497743 (+)
LOC117595843 NA non-coding upstream 110359 6493637 ~ 6494246 (+)
LOC117595885 NA non-coding upstream 284831 6313485 ~ 6319774 (+)
G339300 snrpd1 non-coding downstream 32156 6648179 ~ 6651826 (+)
G339616 NA non-coding downstream 334549 6950572 ~ 6951822 (+)
G339618 LOC108429093 non-coding downstream 337039 6953062 ~ 6959284 (+)
G339659 NA non-coding downstream 616861 7232884 ~ 7233107 (+)
G339661 NA non-coding downstream 631797 7247820 ~ 7250415 (+)
LOC113535938 tmem196,LOC106588729,LOC107667578,LOC107568813,LOC107755951,LOC107571147,LOC107655099 other upstream 260696 6333989 ~ 6343909 (+)
stxbp2 stxbp2,LOC107670524,LOC107587946,LOC107711254,LOC107757364 other upstream 1824219 4761313 ~ 4780386 (+)
LOC113546199 pet100,LOC107672445,LOC107563330,LOC107587949 other upstream 1842003 4757814 ~ 4762602 (+)
brd4 LOC108257120,LOC108429657 other upstream 1851936 4698257 ~ 4752669 (+)
pbx4 pbx4,LOC107757367,LOC107672472,LOC107670485,LOC103392870,LOC102788435 other upstream 1936349 4616324 ~ 4668256 (+)
G339324 NA other downstream 94992 6711015 ~ 6717146 (+)
LOC113536074 LOC108257189,LOC108257413 other downstream 1624674 8240697 ~ 8271499 (+)
G340208 LOC108256789 other downstream 1666937 8282960 ~ 8285204 (+)
sem1 NA other downstream 2296905 8912928 ~ 8915846 (+)
sgce sgce,LOC107722147,LOC107669779,LOC107665667,LOC107731676 other downstream 2502991 9119014 ~ 9134179 (+)

Expression


Co-expression Network