Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC117595880 |
| gene name | NA |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047617.1 |
| NCBI id | CM018563.1 |
| chromosome length | 20335669 |
| location | 561278 ~ 562318 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0043086 | negative regulation of catalytic activity | biological_process |
| GO:0052547 | regulation of peptidase activity | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_034298757.1 | True | 541 | mRNA | 0.39 | 3 | 561278 | 562318 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117595881 | NA | coding | upstream | 20557 | 539688 ~ 540721 (+) |
| LOC117595859 | NA | coding | upstream | 64960 | 485216 ~ 496318 (+) |
| LOC117595878 | LOC108259807 | coding | upstream | 121662 | 428318 ~ 439616 (+) |
| LOC117595858 | NA | coding | upstream | 167088 | 393549 ~ 394190 (+) |
| LOC117595857 | LOC108256799 | coding | upstream | 180183 | 380151 ~ 381095 (+) |
| LOC113528990 | LOC108438405,LOC108438407,LOC108256992,LOC107727715,LOC107753917 | coding | downstream | 97550 | 659868 ~ 664284 (+) |
| LOC113528991 | LOC108256995,LOC108256994,LOC108438408,LOC108438412,LOC107666325,LOC107753917 | coding | downstream | 112779 | 675097 ~ 678530 (+) |
| LOC113529047 | LOC108256995,LOC108256994,LOC108438408,LOC107666325 | coding | downstream | 119962 | 682280 ~ 685488 (+) |
| LOC113528992 | LOC108257051,LOC108438410 | coding | downstream | 128438 | 690756 ~ 693496 (+) |
| LOC113528988 | LOC108257047 | coding | downstream | 144089 | 706407 ~ 711509 (+) |
| G336078 | NA | non-coding | upstream | 120493 | 440439 ~ 440785 (+) |
| G336041 | NA | non-coding | upstream | 156835 | 354030 ~ 404443 (+) |
| G336016 | NA | non-coding | upstream | 290395 | 213146 ~ 270883 (+) |
| G335897 | LOC107737118 | non-coding | upstream | 416807 | 127038 ~ 144471 (+) |
| G335896 | NA | non-coding | upstream | 418748 | 125194 ~ 142530 (+) |
| G336111 | NA | non-coding | downstream | 30998 | 593316 ~ 593539 (+) |
| G336126 | NA | non-coding | downstream | 51954 | 614272 ~ 620153 (+) |
| G336115 | NA | non-coding | downstream | 60414 | 622732 ~ 626949 (+) |
| G336141 | NA | non-coding | downstream | 69456 | 631774 ~ 632301 (+) |
| G336143 | NA | non-coding | downstream | 81613 | 643931 ~ 644138 (+) |
| G336034 | NA | other | upstream | 274063 | 286849 ~ 287215 (+) |
| G336161 | LOC108257052 | other | downstream | 177051 | 739369 ~ 749674 (+) |
| G336172 | NA | other | downstream | 231799 | 794117 ~ 794695 (+) |
| G336213 | NA | other | downstream | 411351 | 973669 ~ 976321 (+) |
| mllt11 | mllt11 | other | downstream | 570637 | 1132955 ~ 1136124 (+) |
| G336334 | NA | other | downstream | 707491 | 1269809 ~ 1335574 (+) |
