Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000313 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 11147655 ~ 11169942 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006259 | DNA metabolic process | biological_process |
| GO:0044428 | obsolete nuclear part | cellular_component |
| GO:0016592 | mediator complex | cellular_component |
| id | description |
|---|---|
| ko04110 | Cell cycle |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000313 | True | 924 | mRNA | 0.49 | 5 | 11147655 | 11169942 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000314 | dnal1 | coding | upstream | 15976 | 11127858 ~ 11131679 (+) |
| AMCG00000304 | NA | coding | upstream | 596741 | 10549932 ~ 10550914 (+) |
| AMCG00000305 | NA | coding | upstream | 598456 | 10548830 ~ 10549199 (+) |
| AMCG00000297 | atp6v1d,LOC106571673,LOC107559096,LOC107568214 | coding | upstream | 1047405 | 10092993 ~ 10100250 (+) |
| AMCG00000307 | NA | coding | upstream | 1075358 | 10063811 ~ 10072297 (+) |
| AMCG00000315 | NA | coding | downstream | 51773 | 11221715 ~ 11233015 (+) |
| AMCG00000350 | tmem121a,tmem121,LOC107594772,LOC107377718,LOC107674105 | coding | downstream | 400403 | 11570345 ~ 11571229 (+) |
| AMCG00000327 | NA | coding | downstream | 502265 | 11672207 ~ 11674687 (+) |
| AMCG00000325 | NA | coding | downstream | 507211 | 11677153 ~ 11679698 (+) |
| AMCG00000326 | NA | coding | downstream | 515612 | 11685554 ~ 11688479 (+) |
| G149566 | NA | non-coding | upstream | 13622 | 11133401 ~ 11134033 (+) |
| G149560 | NA | non-coding | upstream | 56636 | 11090589 ~ 11091019 (+) |
| G149556 | NA | non-coding | upstream | 96427 | 10986970 ~ 11051228 (+) |
| G149538 | NA | non-coding | upstream | 434974 | 10712477 ~ 10712681 (+) |
| G149486 | NA | non-coding | upstream | 1056548 | 10090883 ~ 10091107 (+) |
| G149572 | NA | non-coding | downstream | 5720 | 11175662 ~ 11176066 (+) |
| G149587 | NA | non-coding | downstream | 52887 | 11222829 ~ 11223107 (+) |
| G149591 | NA | non-coding | downstream | 156244 | 11326186 ~ 11326551 (+) |
| G149595 | NA | non-coding | downstream | 168449 | 11338391 ~ 11368225 (+) |
| G149602 | NA | non-coding | downstream | 267427 | 11437369 ~ 11437819 (+) |
| G149525 | LOC100846954,LOC107575789 | other | upstream | 612518 | 10534590 ~ 10535137 (+) |
| G149424 | NA | other | upstream | 1176854 | 9969324 ~ 9970801 (+) |
| AMCG00000281 | cpsf2,LOC106608196 | other | upstream | 1556567 | 9561557 ~ 9591088 (+) |
| AMCG00000286 | sos2 | other | upstream | 1601244 | 9514822 ~ 9546411 (+) |
| AMCG00000285 | map4k5 | other | upstream | 1660966 | 9440061 ~ 9486689 (+) |
| AMCG00000352 | NA | other | downstream | 795613 | 11965555 ~ 11995026 (+) |
| G149859 | NA | other | downstream | 1509728 | 12679670 ~ 12727903 (+) |
| AMCG00000381 | NA | other | downstream | 1796935 | 12966877 ~ 13030853 (+) |
| G150069 | NA | other | downstream | 2520897 | 13690839 ~ 13692589 (+) |
| AMCG00000412 | pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 | other | downstream | 2963196 | 14133138 ~ 14153840 (+) |
