G149466


Basic Information

Item Value
gene id G149466
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 10051176 ~ 10051753 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU188092
CAGTTGTCTTGTTACTGGTGACCACCTGGAATCTCCACTGAGCCTCTGAGACGTGCTTGGACAGCCTTTGCAAGCGAGTGTTAAAGGTCTCTGCTGTGATAGAACAGTTCAGGCACTCTGCAAACTCCATCTCCCTGGTCAGAACCTTCTCATCCTCCCACAGTGTATCATTGTCAATTCCATCCAGGTTCTCCTTCATCATTTTTAGGAAAACCTTCATGGCCACTTCATCAGCTAGAAACCCACAGACTCCTTTTGCAAAGTGCCTCAAGTTCAAGTAACTAAAACACTGACTCTGCACATATGCCTGCTCTGCGGGGTCCTGGGCAACCTCTTTACCACTCTCCCTCAGTTCGGAGAAGTCCATGGGCTCTTCTTGGGGTGTCTCTTGTGTCTTCACCCCTCTCGCATCTCCCTCTGGACCTACTGGTTTACTCTCCGTCTTCTCGTCAGCAAAGTTAGCATCAGACAGAAACAACAGGGAATAAATATTCTCCAAAAGCTCCAGACGAAACATGACGGGCACAGACTCCAGACAGTGCTGGCATTCGACGGCATACTTTCGAAAAAGCACAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU188092 True 578 lncRNA 0.49 1 10051176 10051753

Neighbor

gene id symbol gene type direction distance location
AMCG00000306 arg2 coding upstream 41065 10002721 ~ 10010111 (+)
AMCG00000292 NA coding upstream 131094 9911136 ~ 9920082 (+)
AMCG00000294 smoc1 coding upstream 174232 9864987 ~ 9876944 (+)
AMCG00000293 NA coding upstream 210747 9828089 ~ 9840429 (+)
AMCG00000282 NA coding upstream 304168 9721890 ~ 9747008 (+)
AMCG00000307 NA coding downstream 12058 10063811 ~ 10072297 (+)
AMCG00000297 atp6v1d,LOC106571673,LOC107559096,LOC107568214 coding downstream 41240 10092993 ~ 10100250 (+)
AMCG00000305 NA coding downstream 497077 10548830 ~ 10549199 (+)
AMCG00000304 NA coding downstream 498179 10549932 ~ 10550914 (+)
AMCG00000314 dnal1 coding downstream 1076105 11127858 ~ 11131679 (+)
G149465 NA non-coding upstream 1644 10049265 ~ 10049532 (+)
G149464 NA non-coding upstream 2555 10048396 ~ 10048621 (+)
G149455 NA non-coding upstream 16104 10034574 ~ 10035072 (+)
G149454 NA non-coding upstream 20390 10029694 ~ 10030786 (+)
G149450 NA non-coding upstream 29323 10021422 ~ 10021853 (+)
G149486 NA non-coding downstream 39130 10090883 ~ 10091107 (+)
G149538 NA non-coding downstream 660724 10712477 ~ 10712681 (+)
G149556 NA non-coding downstream 935217 10986970 ~ 11051228 (+)
G149560 NA non-coding downstream 1038836 11090589 ~ 11091019 (+)
G149566 NA non-coding downstream 1081648 11133401 ~ 11134033 (+)
G149424 NA other upstream 80375 9969324 ~ 9970801 (+)
AMCG00000281 cpsf2,LOC106608196 other upstream 460088 9561557 ~ 9591088 (+)
AMCG00000286 sos2 other upstream 504765 9514822 ~ 9546411 (+)
AMCG00000285 map4k5 other upstream 564487 9440061 ~ 9486689 (+)
AMCG00000249 acta1,actc1,LOC103383882,LOC105024319 other upstream 1465903 8579717 ~ 8585273 (+)
G149525 LOC100846954,LOC107575789 other downstream 482837 10534590 ~ 10535137 (+)
AMCG00000352 NA other downstream 1913802 11965555 ~ 11995026 (+)
G149859 NA other downstream 2627917 12679670 ~ 12727903 (+)
AMCG00000381 NA other downstream 2915124 12966877 ~ 13030853 (+)
G150069 NA other downstream 3639086 13690839 ~ 13692589 (+)

Expression


Co-expression Network