G157247


Basic Information

Item Value
gene id G157247
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030143.1
NCBI id CM030143.1
chromosome length 20516281
location 954595 ~ 954974 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU198041
tctttgaggaaagcagggccctgtttggttccaagggtccagtttcttaagactcaaatagctatttaaatgactgacactttcgtatacagtcgacttagtcaattgtccagctgtaaaactccactgatcaggcgggtacaggcgggcagcgcagtctgtaaagttctttatttaataaagtcctttaaaagaattcttcgtacggctcaatctccttctcccagtttaactcttctgttgccggcaaagacttggttggtttctggttccggttcgggcaacagagctacaggttgagctgtggcagcgagtttctggttcaggtgagagagagagagagacagagagagagagagaaagagaccaTGCACTGTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198041 True 380 lncRNA 0.46 1 954595 954974

Neighbor

gene id symbol gene type direction distance location
AMCG00001375 NA coding upstream 149116 798968 ~ 805479 (+)
AMCG00001376 NA coding upstream 161290 787052 ~ 793305 (+)
AMCG00001377 klhdc3,LOC108415716 coding upstream 208497 732164 ~ 746098 (+)
AMCG00001378 NA coding upstream 255320 693768 ~ 699275 (+)
AMCG00001374 NA coding upstream 348128 594773 ~ 606467 (+)
AMCG00001390 LOC106933308,LOC103137645,LOC102233463,LOC106963892 coding downstream 523154 1478128 ~ 1481914 (+)
AMCG00001389 NA coding downstream 552266 1507240 ~ 1536239 (+)
AMCG00001391 klc4,LOC108263390,LOC102210354 coding downstream 621247 1576221 ~ 1599987 (+)
AMCG00001388 NA coding downstream 677839 1632813 ~ 1637912 (+)
AMCG00001393 NA coding downstream 700602 1655576 ~ 1667703 (+)
G157244 NA non-coding upstream 15114 939239 ~ 939481 (+)
G157231 NA non-coding upstream 159038 795318 ~ 795557 (+)
G157195 NA non-coding upstream 376475 577921 ~ 578120 (+)
G157126 NA non-coding upstream 852324 101082 ~ 102271 (+)
G157256 NA non-coding downstream 146935 1101909 ~ 1104516 (+)
G157327 NA non-coding downstream 753971 1708945 ~ 1711815 (+)
G157336 NA non-coding downstream 834417 1789391 ~ 1791527 (+)
G157361 NA non-coding downstream 942100 1897074 ~ 1897280 (+)
G157372 NA non-coding downstream 1049159 2004133 ~ 2083118 (+)
G157196 NA other upstream 365295 587975 ~ 589300 (+)
AMCG00001392 NA other downstream 736702 1691676 ~ 1694986 (+)
G157369 NA other downstream 1016907 1971881 ~ 2000928 (+)
AMCG00001436 gng4 other downstream 2793580 3748554 ~ 3765362 (+)
G157781 NA other downstream 2920235 3875209 ~ 3880779 (+)
AMCG00001433 NA other downstream 3067823 4022797 ~ 4023910 (+)

Expression


Co-expression Network