AMCG00002749


Basic Information

Item Value
gene id AMCG00002749
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 944861 ~ 951696 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002749
TAAGACGAGGAAGACGGACACGCGGAATACAGTCCCATACCTCGGGTGTTGCTGACAGTCTGATAACGTGCGTGCGTGATGACGTAGGCGTGGGATTGACGTGTGCGTGAGGACGTTGACGAGCCCACTTGATTGAGAAGTGTCCAATGTGGCGAGAACCTGGAGAAGACACCATGAAGGACAGCCTGCCTTCAGACACGCTAGATTTAAGCAGGAAGAGCCTCCAGTGTGTGTCAGAGGATGTTCTGAAGATGTCAAGGATAAAACATTTATACCTCAGAGGCAATGAACTGAGCTCTGTTCCCGAGCATCTTTTCAGCAGTTTATCGCATCTGGTCTGGCTGGATGTGAGGAATAACAAAATTACTCGCCTGCCGTCGGAAATCGGGCAGCACAGGTGTCTGAAAACATTACTGTTGGAAGGGAATCCTATTAAAGAACTGCCAGTAGAGTTGGGTAATGTGAACACGCTTAGGGCGCTGAGCTTGAGACACTGTCCTATTGAATTCCCTCCTCAAGACGTTGTGCATCAAGGCCTGCACTCTATCCTGAGCTTCCTGAGGAGCAAGATGGCTGACAAACCTGTCGATGTACGAGATTCTGAGCAAGAGGTTCCCCCGGTTGAGAAGCTGCAGCTGACAGAGCTGGCACACAGTCTCGATGTTTCTGAAGAGTGGGCGAGCGACCGGGAACGGCAGCGGTTCGAGGAGCTGAAGCAGGAGTTGCGGCGGATGGAAGAGGCCGATATCGGGGACGCCGTCTCCCACGAGACCCTGCGCCCGTCACATCCCACGGCCACGGACAGCGATGGCGGCCCCAGAAGCCGAGTCACTCCGAGGAAAAAGGACGCGTTTAAGGGTACGTTCCCAGAGCTCCCACCACGTGGCCTACAGGGTCGAAGGAAAAGCGAGGAGCTCAGACTGGCTGCCCTGAAGGAGTGTAAAGAAAGACAGGCCGTACTGGAGCAGAGGAGgaaGGATCAAGAGCTGCTGAGAGATTGGAGGGCACAGACGAAATCGATGCAAGAGAAAAGAGAGCGGGAACACAAACAGGGGAGAGAGGGCCCCGGAAGAAGAGACGAGGTGGTGAAAAGTGCACCCTATGCAACGCATCCGGAGCTTCACGGACGCATGCATCTGAACATCCAGGGGCCGGGGGCGAGCACACAGAATCGCAGGACAGAGAGATCTTCACAGGAGAGGGCCGCTGGAGAGCTGGAGCAGCGAGTCCGCGCACACGTCCAGGCGGTGCAAGAGCGCCGGAGAGCACCGCGGGGCTCAGCGCAGGAGGAGCAGGCTGCGGCGTGGCAAGACATGGAGGCCGCGCGGCAGCTCCGGTGTGAAGCGGCTCAGCGGACGCTGGAAAGCGATGCTCCTCTGCAGCGTTGCTTCACCGGCTTCACCGGAGAGACGGCGGCGCCAGACTGAGAGCGGGCCTCCTGGCGTGTGTCCGACGCCGACTGCGCGAGGCGTCGTTCCTGAGAGAGGCGTGGATGGGCAATGATGACAGAGGAGGATGTCTCTACTGCTCAGTTCTGCTCTTTACACTAATAAAGAACAAAGTGTTGCCAAACATGTGTTGCTGGATTTCATGCCCCCCCTTTTACTGGCCTGATTGAGGTGACGTCACACAAGGGGTCTGCAGAATGGTCACATGGTCTATAACCTCTCATCACGTTTCAGCATCTTG

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002749 True 1689 mRNA 0.56 11 944861 951696

Neighbor

gene id symbol gene type direction distance location
AMCG00002751 p4ha1,LOC106578992 coding downstream 25386 910725 ~ 919475 (-)
AMCG00002750 NA coding downstream 37415 904455 ~ 907446 (-)
AMCG00002744 NA coding downstream 91131 846563 ~ 853730 (-)
AMCG00002745 micu1,LOC107754762,LOC107702683 coding downstream 101141 841258 ~ 843720 (-)
AMCG00002742 mrps6,LOC107754760,LOC107702688 coding downstream 115692 828807 ~ 829169 (-)
AMCG00002754 dpysl4,LOC107582189,LOC107653119,LOC107706606,LOC107654562 coding upstream 68617 1020313 ~ 1031864 (-)
AMCG00002756 NA coding upstream 81750 1033446 ~ 1034599 (-)
AMCG00002755 jakmip3 coding upstream 83851 1035547 ~ 1069394 (-)
AMCG00002758 ppp2r2d,LOC105009682 coding upstream 143299 1094995 ~ 1103898 (-)
AMCG00002764 glrx3,LOC102791736 coding upstream 443315 1395011 ~ 1410128 (-)
G138430 NA non-coding downstream 46444 895012 ~ 898417 (-)
G138373 NA non-coding downstream 139706 803573 ~ 805155 (-)
G138371 NA non-coding downstream 143094 801214 ~ 801767 (-)
G138352 NA non-coding downstream 196392 747494 ~ 748469 (-)
G138324 NA non-coding downstream 461258 483224 ~ 483603 (-)
G138535 NA non-coding upstream 537866 1489562 ~ 1518053 (-)
G138559 NA non-coding upstream 981664 1933360 ~ 1933995 (-)
G138594 NA non-coding upstream 1132202 2083898 ~ 2084097 (-)
G138678 NA non-coding upstream 1550417 2502113 ~ 2502314 (-)
G138720 NA non-coding upstream 1739734 2691430 ~ 2691869 (-)
AMCG00002752 p4ha1,LOC107753313,LOC106578992 other downstream 19463 920788 ~ 925398 (-)
AMCG00002743 psap other downstream 123270 805760 ~ 821591 (-)
AMCG00002725 NA other downstream 755524 184121 ~ 189337 (-)
G138245 NA other downstream 798021 144926 ~ 146840 (-)
G138741 NA other upstream 1766512 2718208 ~ 2719419 (-)
AMCG00002828 NA other upstream 2977065 3928761 ~ 3953324 (-)
G138932 NA other upstream 3049954 4001650 ~ 4002804 (-)
AMCG00002935 LOC106589936 other upstream 6110777 7062473 ~ 7066350 (-)
AMCG00002945 NA other upstream 6397115 7348811 ~ 7352821 (-)

Expression


Co-expression Network