AMCG00002769


Basic Information

Item Value
gene id AMCG00002769
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 1919040 ~ 1944943 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002769
ATGCCTTTGCATGGGAAGATCGTGGTGATCAAGAGGAGCGGCGCGGACGGGACGGAGTTCCCTCTCACCGCGGCCTCCTGCTTGTTTGGGAGGAAGCCGGACTGTGACATTCGCATCCAGCTGCCTCATGTCTCTAAAGAGCACTGCAGGGTCGAGGTCAACGAGAATAAAGAAGTGATCATTACCAACCTGAGTTCAGTCAATCCGACTCGTCTGAATGGTCAAGTTATTGAACAGGCAGGACGCTTGAAGCACGGAGATCTGATCACAATTATTGATCGTTCTTTTCGGTTTGAGTATCCGCCAGAACCAACTCCCAAGAAAACAAGACCGTCGGGAGCTGCGAAGAGTGAAACCCTTCAGgTGCTTCATATTCAGCAGGTGAAAGATGCAAGTCACCTGTCTTCAGGAAACCGAAGGAAATCGGCTCAGCTCATGTCAGATTCCTCCTATGATCTGAAAGAGGCGAAAGATACTGGCAATGAACAAGTTCATAAGGATCCAGATGGCGGGGAAACCAAGAGTGGCGGAAAGGAAGCGTTCGGCACAGGACCAGAACCGGTCCAATCGAATGAAAACAAGGATCCATTCGGTGAACTTTATGAGATGGTGAAACACAATTTTAAGGCGAGCGACAAGCGCGAAAAATTGGCATCTAACGCGGCTGCCAGGTCACCGTGGCCGACCTCGGGAAGCCCAGATGCCAAAACGCCGAGACGAGAGCCGGAGATGATCATTCGCACCCCGGTTCCAGAGAAGCATGTCCTCGCAGACAAAGACGAACTGAATCGGGAGTCGAATGCCCAGTTTACTCCATCCAACAAGAAGACCCCGGTTAAAAACGAAAGCGCGACTGTTAGCGAGACATCGGCTGCAGAGGCCAAAGTGACCGGCCAGACCCCTAAAGGTACACCGAAACCCACCAGGAGGAGTAAGAAACCGATTGAAGAGAATTTGGATACTGATGTCAGCGATGAGACCCAGCTGAAAACATGTGACGTTCCCACGTTGCCTCTAGAGCAGACCAGCTCTCCCCTGACTGCCTCAGGAGCTCCTGGCGCTGAAGAGAGCCCCCGGAGAGGCCAGCGCTCTTCCCAGGCTCTTGCAGAGGTGGCCAAGACACCCAGCGCGCCCGTTTCTGAGAAGAAAGCGAGGCTGGTGACTCCCTGCAGGCTGAGTGCCGAGGAAGTGGTGAGAGAGCTCCTCTCGGAGAGTGACATGGCCGTGGAAGAGAGCGTGAAGACAGACGCGacctccaaaggaggaagacgGAGGAGGAGTAGGAGTCGGGGATCTTTCACTGAAGTGGCTGTGGTGGAGGAGCCTGTCGTGTCCCCCAGGAGGACAAGCCGGTCTCTTTCACCGGGGGCAGGGACACCAAAGGGTAATGGCTCTGAAGAATCCGCCAAGATTGTGAAGAGCAGTCCAAAAGTGAAGCAATCCCCTAAGCAGTCTCCTCGTGCGTCTCCAAGAAACCTTTCTGGGAAAGCCCAGGAAACTGGATCGCCAGCTCCACCTAGTGGGACAAAGGCAGCAGTGAACACAGAAAAGCCTAAGAAGCGTAGGAGTGGGGAACTGGCAGAGAAATTGGCAGAACCTCCTCTCAAGCGAAAAAGGGAATTAAGTCCCAAGAAAAAAGCTTCACCCAGAAGGTCATCGACATCACCCCCTAAGAAATTAGGTGCTAAAACTCCATCTCCGGCGAAATCGGCCTCTCCTGGTCGGAAGTCCCCCTCTGGCACCAGTAAGAGTCCGTCCCCTGCTGGAAGGAAGAGCAAATCTCCTTCCAAAGAAGATCCCACCACACCAAGAGGCCGGAAATCTGGCACTACGCCGGCCAAGACCCCGTCCCCAGTGCGCAGCCCGGCCAAGACCCCGTCCCCTGGCAGGCGCTCGCTCTCTAGTGCTGTTATGCCCTCCCCGGCTCTCTCTGTGGCTGCAACACCCCATGGGAGAAGATCTGGCTTCGGTGATGCCTCTCCAGTCAAATCTGTACGCAGCACACCAGCAGCCAAGACGCCGTCCCCAATCGAGGCCGTGGCCAGCCCATCCCACGGCCGGAGATCCTCTCCCGCTGCTGCCAAGAAGACCCCCTCCCTGGCAGTCAGGTCTCCGGGCAGAAAATCCCTCGCTGGTGGTTCCAACACCCCACTTTCTTCAGGCGCGTCCCCCAGTCGCAGTGTGAAGACCCCTTCCTCCGGCAGGAAGAGCGCGGCTTCATCGCCAGGCCAGGTGCAGACCCCGGTGGTCCGCGGGCGCTTCTCGGTGTCGCGCATCAGCACCCCCTCGCCTGTGGCCGACGAGAAGGGAGATCTGGCCGAAGTACCTGCTCCGGCTGTCACATCGAAGGCTGCACTGAGGAGGAAGAGCATGAAGTCCACATCCAAGAAGACTCCGTCCATCAGCAGGAGGAAGAGTGCCATGCTGGACGTCGTGCGCTCCAGGCGAAGTGGGGCATCTCAGGCGAATCTTGTTGTTCGCTCCTGGGCCGATATTGTAAAACAAGGGGCTTTGAAGTCCCAGGCTGGTGTTCCTGGGAAGAAGCGCACAATGAAGGGGAAAACTGTTAAGAAAGCGGCGCCGGTGCCACAGACCCCGGCTCAGAGAGTCAAGCAGCACTTCAGCACCGGACATGCAGCGTCCCCTGCCACCATCGTCATTGGACGGGCCCACAGCAAGGCCGTGCTGCCGGCGGGCCGCGCCCCCAGGCTAGTGCACAACGTGGCCGTGCTCAGGAAGAACCTGGAAATTAATGAGAACTTGACCGGAATTGCGGAGATGTTCAGCACACCGGTGAACGAGAGACAGAGGAGAAATCGCCAGTCCAGCGACTACTCTGGAGCCGAGGCTGCTCAGGATGTGGTTTATTCACCACTGACCGAAGCGTCTGTAATGAACACCCCTGAAGAGACGGGTGAAATGGTTGTCTCTCCACTGAGTGTCACCAGCACTGCTAAACAGGGACGCTACAACAAGGATGCCGTGTCTCGTCTCCTCCAAGAGAGGACTTCCAGCTTTGACACAGTTGGGACACCTCTGGTCAAGAGCTCGACCGTGCGCAGAGCTAGTGCTGGGGACTCCGTGACCCCTAAAGAGAAGGTCCAAGCTGTCAAAATGGTCTCCTTAGAGGCTGAAGAGCCAGCCAGACCTACGAGGCTCTCGACACCCAGACAGAAGGCCGAGCCGCCGCTGCCCCTGACGGGAGTGAAGAGGATCATGACAACTCCCAAACAGAAGACCCAACAACTGGAGGACCTCCGAGGCCTGAAGCGGCTGCTGAAGACCCCGAGAGGCCCGAAACTAGTCGTGGAGGAATCTCTCGTGGGAGTGAAGGGATTGGTCAAGACTCCGAAGACTAAGGGTCATCCAGTAGAGGACATGGTTGGTGTGAAGAGGGTGATGCGGACCCCGAAGACGAAGGGGCAGCCGGTGGAAGATCACTTTGGCATCAGCAGACTGGTGAAGTCCCCTAAACAGCGAGGCGGCCCGGTCGAGGACTTCACCGGGTTAGAGGAGCTCTGGCAAGAGCCTCTGCAGAAGCTGGACACGAGCAAGACTGAGCCTGAGAGCAAGgtgtcGGAAAAGGTGCTCTCTCCTAAGCGTGGTAAAACATCAGGCAGCTTTACGGAGATGACTGTTGaaaacaaagtaTCTTCTCCAAAGCGTGTCGCACAACCAACAGAAACCCAGAATGAAGCAGAAACGCTGCTGTCTTCAGTGCAGAAACCTGGACGGGGAAGGAAGGCAAAGGAAAGTGCGGAGGCTTCGACTGAACCACGGACCGCCGTGCCGGCGCTGAAGCGGCCCCGTCGGGGGAGAATCACAGACCTGTCGGAGGAGACCCCTGCCTCCGTGACTAAATCTGCAAGAGGGAGGAAGGTAACGCAGAAACAAGTCTCGTTTGAAGCAGCGGAAGTTGCTCTGATGACCCCTGCAGTTAGGAGGACACGTCGGGACCCAAAAAGTAATGAACTGGACTCCACTGCCTCCCCTGCGCCCACCGTGTCGTCCACAAGAGGGCACAAGGCCAAGATTGGTGCAGAGCCGACTATTCAGGTGGTTGTGGAAGCTGCTGACCCGATCCCCCAAAATGTCACCGCATCCCCTGCTGTTAAGACGCCAAGTCCAGTAGAGACCCCTGCCGCGGAGTTAGAGGAGGTTCCGGCTCCGGTCAAGAGACCTGGAAGGGGAAGAAAGGCGAAACCGGTCCCGAAGGAGGAGGGTGCACTTGGCACGGAGACTGCTGCGGAGGAAAGTGTCTCTGAAAGTGGGAGGAAACTCTCCACACTCAAACGTGTCAGCGCCATAGATGTACAGGCAACCGCTTCTCCGGCCCCGGCGAAGAAGATGAGACGAGGCAGAAACGCTCGGCCGATCGAGGGTCTCGGCCCGGTAGCTTCAGAAGCGGAGCGGTCGGTGGCTGAAACGGTGGGAGTTAAATCTGTTTCTCCGGTTCCAGTGAGAACGGCAAGAGGCAGAAAGGCGAGAGTTGAAGTGGAAGAAGTGGAACAGACTAAAGCTTCAAAGTCACTGCCACAAAGGTCAGCTCGTGGAGGAGCTAAGGGTGCCACGCCCCAGATCTTTGCCTCTCCTGCCCCTGCCAAACTGCCTGGGCGAGGAAGAAAGGCAGCAGAGAAAGTGGAGAAGATACTTCCATCAACCGCCGAAAGCGTCCGTGATTTGCCCACATCCAAGAGGGCACGGAAAGTAGTGATCTCCAAAGAAATGTCTTCCACTCCTGCCAGGACAGTTAGAGGGAAGAGTAGTGCAACCCCTTCTTTGGAATCTGCTCCCCCTGCTAGGAAAGGAAGAGGACCGGGTCCCAAGACCGCTCAACCCACTGCGGACCTCAGAGCTGAAGCCGTCCCGGCTGCTGTGAAAAGAGGGACCAAAAGGAGAGCAACCTGCGAAGAGGTCGTCCAAGCAATCCTGGAAGACCCATCCTCTTCAGATGCGTCCAGCGCTGTGGCGCCGAAGAGGCCGCGAGGGAGGACGGCCAGAGCACCCGCCGCCGACCTGCCGAAGGAAAGAGATAATGCCGCCAAAGCCGCAGCGGAGACGAGTAAAAAGGGGCCACGCTCGAGGCGCAGGGATGGTGAGACGGCGGAGACGTCTGAGGAGCAGCCCAGGGAAGAGAGCAAGCCCCGGCCCACAGAGGTTTCACCCAAGAAACCCGTTGGCAGGCCCAAGAGGAAGACGGCCCCAGAGCCCGAAGTCCCGGCTGCCGTCCCCAAAACCCCCAGAGGGCGACGTGTGGCGAAAGCTGCTGTTGAGCCCAAAGCTCAGCCTCAGGAGGAAGACCTGGGGTTTGACAAAGGAGTTCAGAGCCCCGGTCCGGCTGTAGGGAGACCCAGGTGCTACGACAACGAACACAATGAGACGTTAAAAGTAATGAACTGGAAACTGCTGCATCCCCTGCACCTGCCGTCCATGAGAGGCCGGCGCCGTGCGGAGAGGGGCTCGGTGGATCTGCGGCGGCCCCTGGACGTCGTACCCAGAGATGAGCACTGCTGTGTGAGGAAGTGTAGCCCTGCTCTGCGACGGCTGGAGTGGAGGCTCATTAACCCACCTCTCTCGTTAGCCGCCCTGCTCTTGATCTCGTACAGCAGGGCAGCGCACCTCTCCTCGGCTCTCCTGCGCCCTTTTAGAGAGAGCGCCAACCGGTCGTGA

Function

GO: NA

KEGG:

id description
K17582 MKI67; antigen KI-67

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002769 True 5670 mRNA 0.58 17 1919040 1944943

Neighbor

gene id symbol gene type direction distance location
AMCG00002767 mgmt coding downstream 367056 1541186 ~ 1551984 (-)
AMCG00002764 glrx3,LOC102791736 coding downstream 508912 1395011 ~ 1410128 (-)
AMCG00002758 ppp2r2d,LOC105009682 coding downstream 815142 1094995 ~ 1103898 (-)
AMCG00002755 jakmip3 coding downstream 849646 1035547 ~ 1069394 (-)
AMCG00002756 NA coding downstream 884441 1033446 ~ 1034599 (-)
AMCG00002768 NA coding upstream 5440 1950383 ~ 1968438 (-)
AMCG00002771 NA coding upstream 111484 2056427 ~ 2058241 (-)
AMCG00002772 dock1,LOC107740868 coding upstream 182687 2127630 ~ 2168579 (-)
AMCG00002775 dock1,LOC102795082 coding upstream 344165 2289108 ~ 2329191 (-)
AMCG00002782 NA coding upstream 496928 2441871 ~ 2444589 (-)
G138535 NA non-coding downstream 400987 1489562 ~ 1518053 (-)
G138430 NA non-coding downstream 1020623 895012 ~ 898417 (-)
G138373 NA non-coding downstream 1113885 803573 ~ 805155 (-)
G138371 NA non-coding downstream 1117273 801214 ~ 801767 (-)
G138352 NA non-coding downstream 1170571 747494 ~ 748469 (-)
G138594 NA non-coding upstream 138955 2083898 ~ 2084097 (-)
G138678 NA non-coding upstream 557170 2502113 ~ 2502314 (-)
G138720 NA non-coding upstream 746487 2691430 ~ 2691869 (-)
G138737 NA non-coding upstream 762926 2707869 ~ 2708075 (-)
G138738 NA non-coding upstream 769434 2714377 ~ 2714688 (-)
AMCG00002752 p4ha1,LOC107753313,LOC106578992 other downstream 993642 920788 ~ 925398 (-)
AMCG00002743 psap other downstream 1097449 805760 ~ 821591 (-)
AMCG00002725 NA other downstream 1729703 184121 ~ 189337 (-)
G138245 NA other downstream 1772200 144926 ~ 146840 (-)
G138741 NA other upstream 773265 2718208 ~ 2719419 (-)
AMCG00002828 NA other upstream 1983818 3928761 ~ 3953324 (-)
G138932 NA other upstream 2056707 4001650 ~ 4002804 (-)
AMCG00002935 LOC106589936 other upstream 5117530 7062473 ~ 7066350 (-)
AMCG00002945 NA other upstream 5403868 7348811 ~ 7352821 (-)

Expression


Co-expression Network