AMCG00002809


Basic Information

Item Value
gene id AMCG00002809
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 3124924 ~ 3133886 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00002809
gCGGACAGGCACAAGCGCCTCAGTCGGAGGTGTCCCTGTGCGCGGCGCGGCCAGGCTGTCcgtctctgtccgtctctgtccgtctctgtcCGTCTGGACGTGTGCACAGCTCTGCCCGAAGAGAGAGGGCCAGACCAGGAGGATGAATAACAAAGAGGACAGCGGCAGCAGGTGTTCCACGGCCCCTCTCTCCAGCTTCACCATCCAGTCCATCTTGGGGACCCCGTCCGAAGGTGGGCGCAAGGAGCCCCCCAAAGCGGCGCTGCAGAGGAAGCGACCCCTGTCCGTGTCGTCCGAGGAGGAGGGCAGCGCCGGCGAGGACTCTGCGGACTGCTGCTGCCCCGAGCCCGGACTCCCCGGACACGGCCAGCCATGCACCCCTCAGCCCAAAGCCCTGGGCTTCACCTGCCTCAGTGCCACTAAAGGAATTACACCCGAGCAGGAGCGGCGGCCGCACCTGACGCAGCCGCGGCTGCAGGATTACAGAGAGGGGCAGGAGGGGCCCCTGTCCGAGGAGCGCCAGGGCGACGCGGCGGACAAACAGGGCCACTCGGCCAAGAAGAAGACGCGCACGGTGTTCTCCCGCAGCCAGACTTTGGTGGGGATGCCGCTGGTTTTTAGGGACAATTCCCTGCTTAGGGTGCCGGTGCCCAGGTCCATTGCCTTCCCCACGCCTTTATACTACCCGGGCAGCAACCTACCAGCTTTACCACTGTACAATCTCTACAACAAGATTGAGTACTGA

Function

GO:

id name namespace
GO:0042472 inner ear morphogenesis biological_process
GO:0048916 posterior lateral line development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00002809 True 745 mRNA 0.64 4 3124924 3133886

Neighbor

gene id symbol gene type direction distance location
AMCG00002807 bub3,LOC106575478 coding downstream 3827 3115861 ~ 3121097 (-)
AMCG00002802 gpr26,LOC107387797,LOC100699461 coding downstream 151128 2965994 ~ 2973796 (-)
AMCG00002798 NA coding downstream 365057 2758874 ~ 2759867 (-)
AMCG00002797 NA coding downstream 373458 2750789 ~ 2751466 (-)
AMCG00002799 NA coding downstream 375617 2748112 ~ 2749307 (-)
AMCG00002808 NA coding upstream 5062 3138948 ~ 3140649 (-)
AMCG00002806 acadsb,LOC107746745,LOC102776774 coding upstream 28915 3162801 ~ 3168504 (-)
AMCG00002805 ikzf5,LOC107744272,LOC104955501,LOC107583523 coding upstream 35280 3169166 ~ 3180564 (-)
AMCG00002811 NA coding upstream 47216 3181102 ~ 3191496 (-)
AMCG00002812 NA coding upstream 64782 3198668 ~ 3206556 (-)
G138799 NA non-coding downstream 11842 3060561 ~ 3113082 (-)
G138742 NA non-coding downstream 404220 2720412 ~ 2720704 (-)
G138738 NA non-coding downstream 410236 2714377 ~ 2714688 (-)
G138737 NA non-coding downstream 416849 2707869 ~ 2708075 (-)
G138720 NA non-coding downstream 433055 2691430 ~ 2691869 (-)
G138873 NA non-coding upstream 242362 3376248 ~ 3378038 (-)
G138906 NA non-coding upstream 791281 3925167 ~ 3928618 (-)
G138948 NA non-coding upstream 941729 4075615 ~ 4076838 (-)
G139024 NA non-coding upstream 1321906 4455792 ~ 4456002 (-)
G139025 NA non-coding upstream 1332068 4465954 ~ 4466189 (-)
G138741 NA other downstream 405505 2718208 ~ 2719419 (-)
AMCG00002752 p4ha1,LOC107753313,LOC106578992 other downstream 2199526 920788 ~ 925398 (-)
AMCG00002743 psap other downstream 2303333 805760 ~ 821591 (-)
AMCG00002725 NA other downstream 2935587 184121 ~ 189337 (-)
G138245 NA other downstream 2978084 144926 ~ 146840 (-)
AMCG00002828 NA other upstream 794875 3928761 ~ 3953324 (-)
G138932 NA other upstream 867764 4001650 ~ 4002804 (-)
AMCG00002935 LOC106589936 other upstream 3928587 7062473 ~ 7066350 (-)
AMCG00002945 NA other upstream 4214925 7348811 ~ 7352821 (-)
AMCG00002970 cj104,anapc16 other upstream 4797280 7931166 ~ 7938241 (-)

Expression


Co-expression Network