Gene
RNA
| Item | Value |
|---|---|
| gene id | G138737 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030139.1 |
| NCBI id | CM030139.1 |
| chromosome length | 23121578 |
| location | 2707869 ~ 2708075 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU174502 | True | 207 | lncRNA | 0.55 | 1 | 2707869 | 2708075 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00002791 | fam175b | coding | downstream | 36796 | 2660906 ~ 2671073 (-) |
| AMCG00002790 | zranb1 | coding | downstream | 53459 | 2635291 ~ 2654410 (-) |
| AMCG00002785 | edrf1,LOC104964479 | coding | downstream | 215986 | 2480058 ~ 2491883 (-) |
| AMCG00002781 | NA | coding | downstream | 241174 | 2460051 ~ 2466695 (-) |
| AMCG00002783 | NA | coding | downstream | 257728 | 2445929 ~ 2450141 (-) |
| AMCG00002799 | NA | coding | upstream | 40037 | 2748112 ~ 2749307 (-) |
| AMCG00002797 | NA | coding | upstream | 42714 | 2750789 ~ 2751466 (-) |
| AMCG00002798 | NA | coding | upstream | 50799 | 2758874 ~ 2759867 (-) |
| AMCG00002802 | gpr26,LOC107387797,LOC100699461 | coding | upstream | 257919 | 2965994 ~ 2973796 (-) |
| AMCG00002807 | bub3,LOC106575478 | coding | upstream | 407786 | 3115861 ~ 3121097 (-) |
| G138720 | NA | non-coding | downstream | 16000 | 2691430 ~ 2691869 (-) |
| G138678 | NA | non-coding | downstream | 205555 | 2502113 ~ 2502314 (-) |
| G138594 | NA | non-coding | downstream | 623772 | 2083898 ~ 2084097 (-) |
| G138559 | NA | non-coding | downstream | 773874 | 1933360 ~ 1933995 (-) |
| G138535 | NA | non-coding | downstream | 1189816 | 1489562 ~ 1518053 (-) |
| G138738 | NA | non-coding | upstream | 6302 | 2714377 ~ 2714688 (-) |
| G138742 | NA | non-coding | upstream | 12337 | 2720412 ~ 2720704 (-) |
| G138799 | NA | non-coding | upstream | 352486 | 3060561 ~ 3113082 (-) |
| G138873 | NA | non-coding | upstream | 668173 | 3376248 ~ 3378038 (-) |
| G138906 | NA | non-coding | upstream | 1217092 | 3925167 ~ 3928618 (-) |
| AMCG00002752 | p4ha1,LOC107753313,LOC106578992 | other | downstream | 1782471 | 920788 ~ 925398 (-) |
| AMCG00002743 | psap | other | downstream | 1886278 | 805760 ~ 821591 (-) |
| AMCG00002725 | NA | other | downstream | 2518532 | 184121 ~ 189337 (-) |
| G138245 | NA | other | downstream | 2561029 | 144926 ~ 146840 (-) |
| G138741 | NA | other | upstream | 10133 | 2718208 ~ 2719419 (-) |
| AMCG00002828 | NA | other | upstream | 1220686 | 3928761 ~ 3953324 (-) |
| G138932 | NA | other | upstream | 1293575 | 4001650 ~ 4002804 (-) |
| AMCG00002935 | LOC106589936 | other | upstream | 4354398 | 7062473 ~ 7066350 (-) |
| AMCG00002945 | NA | other | upstream | 4640736 | 7348811 ~ 7352821 (-) |
