AMCG00003937


Basic Information

Item Value
gene id AMCG00003937
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 25933027 ~ 25938329 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003937
TTGCAATCCGGTAGAAATAAGCGCTGTGCTTCTCAGTATAGCCTAAGTGTACGTTATCTTCAGTACAGCTGGTAAGATGGGTTAGTCTAGGATGATTGTCCCATGTTCTTCAGCCCtttaaattgtatatcttgTACTTGTTGGAAAATAAGGAATCAACCATTTCTGCATTACAGGATGGCACAATCTCCACAAACCCCAACAACCTCTCATTTCGCCCTTTATTCCAGTGCCCacaaggacacaattttaaGCAAATTTGAGGAACTTAGGAAAAAGGATTTGTTGTGTGACATCACTCTGATTGTTGAAGATGCCCAGTTTAAGGCCCACAAGGCCTTGCTGGCTGCCAGCAGTGAGTATTTCTCTGTGATGTTTACTGGTGAGGGACAAGTGTGCCAGTCTATCTACATGCTGGATGGGATGGCTGCAGACACTTTCAGAGCAGTGCTGGAGTTTATCTACACTGGGCATGTGTCTGTGGAGAGGAGCACCGCAGAGCAGCTCCTGGCGATGGCCCACTACCTGAAAGTCGTTGACCTTGTGAAGGCTTACACCGAGTTTCAGAGTATGCACAGGCCCAGTCAGGATGGGAAATCGGATTCACACCAGAGAGGAGAAAATAATGAGGAGGCTGTTAAACCCAAACGCAAAAGAGGTCGGCCAAGGAAGGATGAGGTTTTGACAGGGGCATCAAATGCTGCAGCTCCTGgttcaagtaaaataaaagaagcCCCAGGGATCAATAATCTAGTGACTTGTGTTCAGGAGGCAACAGTGCAACCGGTTATAGAAGAACCTATAGAAGAGAACAGAGAGAGTGAAGACGTAGCAGATTCTGATGCCCACATGGATCCTTCCAATGACAAAGATGTGGACTATGACCCCAAATTGGAGGGGAAGCTGTGTCCCCGTAGCCGCTACAGCAAGCGCAGGATAAAGCCCCCGGTGAAATTGATTGGCTTTCGGCTGGGAGAAGATGTTGCTGAGCAGGGAGAGCCTGGGaaaagagggaggaagaggaaataTCCCAAAACTGAGGCCCGCTGTGAGGATTGTGGGAAAGTCTTCaaaaaccatttgtttttaacaatccACCAAAGAACACATACTGATCAGAAATCTTTCAGCTGTGATCAGTGTGGGAAGACTTTCAGTCAGAGAAGGCAACTGAAGAGTCATTACCGAGTTCACACAGGTAAGCCCTTACCAGAGTGTGCACAGTGCCATCGAAGGTTCATGGATGCTGCTCAGCTTAAGAAGCATCTGAGAACACATACAGgagagaaaccatacatTTGTAGCCTCTGCAACAAGTCTTTCTCAGACCCGAGCGCCAAGAGACGCCATGTTACTTCTCACACTGGGAAGAAGCCTTTCACCTGCTCCCTCTGCAGCCTGACCTTTGCCCGACTCGACAACCTCAAAGCTCACACCAAAACGCACAACAAGGAGCGGCCCACAGAGGTCCCTCGAGAGGTGGCGACCGTTGAGGGAAATGCAGGGGTGGAGGAGGTGCGCAGCATTCTGCAGCTCCAGCAGTACCAGCTCCCCACCTCAGGGGAGCAGGAGATCCAGCTGGTGGTCACCGGCGAGGTGGACAACATTAACTTCGTGCCCGGAGAGGAGCAAGGCATAAGCATCATCACCGCCCAGGCCTCGGAGAGTCTGACTCCAGAGCAAACGTCAGGGCTGACCTTGCTGACGCAGCCCTCTCAGCACGTGCAGAACCTGGCCCTGGTCACTCAGGGAGAGACGGCCGAGCAGATCCAGACCATCAGTGTCATGGAGGGTCAAGTGTCTACAGGGCAGCCTGAGCAGATGCATGTGATCACCCTGACGAAGGAGGCCATGGAGCACCTGCAGGCCCACCACGGGCCGCCCCAGCAGCTACAGATCAACCAGCGGGCCGGCCAGTCTCTCCACCTGATGCAGGAGTCCACCCATCAGCTCCCCATCGCCCAGGCACCTCAGCCTCAGCAGCTGCAGATGGGCAGAGACCAGCAGGGCCAGGCCATACACATCAGTGGCCAGACTGCCCAGCCCATCTCCATCAGCCAGACGACTCAGCAGATCCCCAGTCACCAGATTCAAGGGCAGACGTTCCAGATCCAAGCTGGCACTGTGTCCTATCTCTATACCACCAGCTTAGCCCCGCAGAACTGAACTGGGGTGGGATGTGTCTTTGATACTGCTTACAAAAGTGGACTTGTCAGTTCATCATTCTGCAGTTTTAGTACTGGATTGTCTTGTAAGCAatgtctgatttctattaaaaacTCGCAGctctgatttttcttttccttttaattgaagtgatcttgaaaatgttt

Function

GO: NA

KEGG:

id description
K10503 ZBTB24, BIF1; zinc finger and BTB domain-containing protein 24

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003937 True 2333 mRNA 0.51 4 25933027 25938329

Neighbor

gene id symbol gene type direction distance location
AMCG00003938 NA coding upstream 5888 25915420 ~ 25927139 (+)
AMCG00003939 NA coding upstream 18002 25904385 ~ 25915025 (+)
AMCG00003931 wasf1,LOC106571806,LOC107739187 coding upstream 165239 25763983 ~ 25767788 (+)
AMCG00003933 wasf1,LOC106607981 coding upstream 185586 25735715 ~ 25747441 (+)
AMCG00003934 NA coding upstream 287726 25632524 ~ 25645301 (+)
AMCG00003943 NA coding downstream 1553 25939882 ~ 25943047 (+)
AMCG00003944 NA coding downstream 8314 25946643 ~ 25965249 (+)
AMCG00003947 NA coding downstream 81215 26019544 ~ 26019825 (+)
AMCG00003954 NA coding downstream 319097 26257426 ~ 26257668 (+)
AMCG00003949 snx3 coding downstream 334090 26272419 ~ 26279485 (+)
G4526 NA non-coding upstream 3347 25929467 ~ 25929680 (+)
G4512 fig4b,fig4 non-coding upstream 44714 25814291 ~ 25888313 (+)
G4482 NA non-coding upstream 322731 25610078 ~ 25610296 (+)
G4452 NA non-coding upstream 378938 25481598 ~ 25554089 (+)
G4362 NA non-coding upstream 1245890 24685016 ~ 24687137 (+)
G4536 NA non-coding downstream 5814 25944143 ~ 25944352 (+)
G4589 NA non-coding downstream 287164 26225493 ~ 26227500 (+)
G4590 NA non-coding downstream 290599 26228928 ~ 26229252 (+)
G4592 NA non-coding downstream 305333 26243662 ~ 26244054 (+)
G4593 NA non-coding downstream 305918 26244247 ~ 26244637 (+)
AMCG00003930 wasf1,LOC107661360,LOC107556997,LOC107739187,LOC107564591,LOC107667835 other upstream 137232 25785173 ~ 25795795 (+)
G4360 NA other upstream 1249107 24683400 ~ 24683920 (+)
AMCG00003910 zbtb2b other upstream 1803135 24118384 ~ 24129892 (+)
AMCG00003902 NA other upstream 1890142 23838589 ~ 24042885 (+)
AMCG00003898 LOC105418227,LOC108432361,LOC107549029,LOC107708771,LOC107571650,LOC107756347,LOC107656533 other upstream 2206883 23710029 ~ 23726144 (+)
AMCG00003948 sesn1,LOC102782344 other downstream 142954 26081283 ~ 26085122 (+)
AMCG00003962 NA other downstream 644338 26582667 ~ 26586892 (+)
G4831 NA other downstream 2124034 28062363 ~ 28103211 (+)
AMCG00003988 NA other downstream 2441482 28379811 ~ 28399741 (+)
AMCG00003990 NA other downstream 2516090 28454419 ~ 28465646 (+)

Expression


Co-expression Network