Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00003943 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 25939882 ~ 25943047 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006457 | protein folding | biological_process |
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | molecular_function |
| id | description |
|---|---|
| K12739 | PPIL6; peptidyl-prolyl cis-trans isomerase-like 6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00003943 | True | 1205 | mRNA | 0.48 | 8 | 25939882 | 25943047 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003937 | NA | coding | upstream | 1553 | 25933027 ~ 25938329 (+) |
| AMCG00003938 | NA | coding | upstream | 12743 | 25915420 ~ 25927139 (+) |
| AMCG00003939 | NA | coding | upstream | 24857 | 25904385 ~ 25915025 (+) |
| AMCG00003931 | wasf1,LOC106571806,LOC107739187 | coding | upstream | 172094 | 25763983 ~ 25767788 (+) |
| AMCG00003933 | wasf1,LOC106607981 | coding | upstream | 192441 | 25735715 ~ 25747441 (+) |
| AMCG00003944 | NA | coding | downstream | 3596 | 25946643 ~ 25965249 (+) |
| AMCG00003947 | NA | coding | downstream | 76497 | 26019544 ~ 26019825 (+) |
| AMCG00003954 | NA | coding | downstream | 314379 | 26257426 ~ 26257668 (+) |
| AMCG00003949 | snx3 | coding | downstream | 329372 | 26272419 ~ 26279485 (+) |
| AMCG00003956 | NA | coding | downstream | 376720 | 26319767 ~ 26328027 (+) |
| G4526 | NA | non-coding | upstream | 10202 | 25929467 ~ 25929680 (+) |
| G4512 | fig4b,fig4 | non-coding | upstream | 51569 | 25814291 ~ 25888313 (+) |
| G4482 | NA | non-coding | upstream | 329586 | 25610078 ~ 25610296 (+) |
| G4452 | NA | non-coding | upstream | 385793 | 25481598 ~ 25554089 (+) |
| G4362 | NA | non-coding | upstream | 1252745 | 24685016 ~ 24687137 (+) |
| G4536 | NA | non-coding | downstream | 1096 | 25944143 ~ 25944352 (+) |
| G4589 | NA | non-coding | downstream | 282446 | 26225493 ~ 26227500 (+) |
| G4590 | NA | non-coding | downstream | 285881 | 26228928 ~ 26229252 (+) |
| G4592 | NA | non-coding | downstream | 300615 | 26243662 ~ 26244054 (+) |
| G4593 | NA | non-coding | downstream | 301200 | 26244247 ~ 26244637 (+) |
| AMCG00003930 | wasf1,LOC107661360,LOC107556997,LOC107739187,LOC107564591,LOC107667835 | other | upstream | 144087 | 25785173 ~ 25795795 (+) |
| G4360 | NA | other | upstream | 1255962 | 24683400 ~ 24683920 (+) |
| AMCG00003910 | zbtb2b | other | upstream | 1809990 | 24118384 ~ 24129892 (+) |
| AMCG00003902 | NA | other | upstream | 1896997 | 23838589 ~ 24042885 (+) |
| AMCG00003898 | LOC105418227,LOC108432361,LOC107549029,LOC107708771,LOC107571650,LOC107756347,LOC107656533 | other | upstream | 2213738 | 23710029 ~ 23726144 (+) |
| AMCG00003948 | sesn1,LOC102782344 | other | downstream | 138236 | 26081283 ~ 26085122 (+) |
| AMCG00003962 | NA | other | downstream | 639620 | 26582667 ~ 26586892 (+) |
| G4831 | NA | other | downstream | 2119316 | 28062363 ~ 28103211 (+) |
| AMCG00003988 | NA | other | downstream | 2436764 | 28379811 ~ 28399741 (+) |
| AMCG00003990 | NA | other | downstream | 2511372 | 28454419 ~ 28465646 (+) |
