AMCG00004013


Basic Information

Item Value
gene id AMCG00004013
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 29663803 ~ 29681594 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004013
CTCGAAGTAAACATTGGAAATGGCTATTTGTACAGCCGGGGGGAGGTTGGAAAATGAGTAAAATATGAAACGACGGCCTATTGCTGATTTAAACTGGTATTTAGAAATGCCGTCATGCATGTGGCAAAATCTGTTTGACGTGTTGTGTAGAGCAAAATCCAGCTTGACTCTGCTGCTTTCAACCTAGTAGAATTCCAGCCCAATGTTCCCTATGTTAACAATTCTGAGCATGTTTTACTATATCTGTCTTCGGCGTCGAGCCAGGACGGGGACAAGAGGAGAGGTTATGAACAGTCGCAGGGCCATTGAATCCAACCACCGCACTCTACCTCTTACTGTCGTTGTACAACAGTATGCCAAAGAAGTGCTAGACTTTAGTTCTCATTATGGCAGTGAGAACAGCATGTCCTATACTATGTGGAACCTGGCTGGGATGCCCAATGTGTACCCGAGCTCTGGAGACTTCACACAGACGGCTGTGTTTCGCATGTATGGGAAATGGTGGGAGCAGTGTGCCAGTGCACCGCAGCCTTTTAGAAGGACTCCGCTCAACTTCCACAGTCAGGATTACGTAGAGCTTGCATTTGAGGAGCCTGTGTACCCGACAGCCATTGATGTTTTGGAAACCTACCATCCTGGAGCAGTTATCCGGATTCTTGCCTGTTCACTCAATCCTTTCTCCCAGAATCCACCTGCAGAAGTAAGatGGGAGGTGCTTTGGTCGGGAGAACCTACGAAAACGCTCACTCCTCAGGCACGACAGTTTTCACCCAGCATAAAGCAAATCAACTTTGCAACCAATCTCATACGTTTAGAAATAAACAGCTCATTACTGGAGTATTACACCGAACTGGATGCGGTTGTTCTTCACGGTGTGAAAGAGAGGCCGATTTTGTCCCTTTACAAGATGCCTGTAATAGACATCAATGACCTGAGTGACAGTGATGAAGAGAAGGACATGTGTGAGTCTGGAAGTCTGTGTAAGCGGTGTGGGGGCTCCAGTCTCAAGGAACACACGGGGAATGGTTTCTTTGATAAACTTCCCTATGAGTTGATTCAGCTGATTGTGAGTCACCTGACCTTACCTGACCTGTGCAGGCTGGCGCAGACCAGTAAGCTTTTGTACCAGCACTGCTGTGATCCTCTTCAATACATCCAGCTGAGTTTACAGTGTTACTGGTCAAGACTGACTGATGCTTCTCTCGAGTGCTTGCAGTCTCGCTGCACTCTCATTCAGAGGCTCAACATGTCCTGGTGTGGCAATAAAGGAGCAATCACAATAACAGGGTTTTGCAGTTTTATGAAAGTGTGTGGCTCAGAGCTCGTTTGTCTTGAGTTGGCCTGTTGCCACTTCCTGAATGAAGCCTGCATAGAGGTCATTGCTCAGACGTGCCCAAACCTCCAGGAACTAAACCTCTCCTCCTGTGATAGGCTCCATCCTCAGGCCTTTAACCACATTTCTAAAATGTCAGGCTTAAGACGCCTCATCCTCTATCGCACAAAAATCGAGCAAACAGCAATGCTCAGCATTCTGACTTTTTGCACAGAGCTTCGGCACCTTAACCTCGGCAGCTGTGTCATGATTGAAGATTATGACTTAATTGCTAGCATGATCAGTGCAAAGTGTAAAAAGCTCAGATCCCTGGACCTGTGGAGGTGCAAGAACATGACTGAGAAAGGACTGACGGAGCTGGTGTCAGGCTGCCGActgctggaggagctggacctGGGCTGGTGCTCCACCCTTCAGAGCAGCACTGGCTGCTTTGTGCACCTGGCTCGCCAGCTGCCCAGTCTGCGCAAGCTCTTCCTCACCGCCAACAGGACCGTGTGCGACTCAGACATTGAGGAGCTAGCCAACAATTGCCAACACCTGCAGCATATCGACATCCTTGGCACGCGCATGGTGAGCCCAGCATCACTTCGCAAGTTGCTGCAATCGTGCAAGAAGCTGCTGTTGCTTGACGTGTCCTTCTGTTCCCAGATTGATTACCAGGCGGTACAAGAGCTCACAGTGCATTTCCCCAATGTGTCCATCAAAAAGAGCTTCACTCAGTGACCTCCCCGACTCTTGTCACTCTCAGTCGGAAGTCTGTCAGAGTACAGTTGCCCAAGGATCAGAATTGGAAGAGGAAGTCTTCTTCTCTGTGTGTTGTAAGTTAATGACGGATTTCCATATTCACATGTAATGGCTTACTTTCATCACCACCTGAAGAAACGACCTTACATTTCACCTAAAGTAATACATGGGATTTGATCAAAGGGTCTCAGTCCCATATTAAAGATCTGTGCAATAATGTTTAATCTTGTACATTTCCTTCCTTACACAACCCTAAGTACACCACTGTCAACTTTCACAGTTGAAATTGAATGCGACTCTGTTTGTCCTACTATAAAGTATCTCCCAACACCCTGCAGGATTGAAGCAAAACCgccactttcattttttgtacAAAACCATGTCTAGTCttttgtaaagagaaaaaagacaacagGTGTGGATTTTCTATTGCAATTTTAATCTCTTTGTAGCGGGGAAAAAAGctatcaatatttaaatttctgTTGTAATATTCTTGTGCTAACTAACAGCTTGAGATGCACATGATTGTTAATCCTTCCTTTCCAATTATCAAGCTGTTTTCCATCCTTGGAGTGGTGTAtaagagcaaagaaaaaaaactctatAAGACCTCTCCTAAAACTTGGAAGTTTCCATTTGAACACGTGCAAGCGTTTACATTATTTGTGCCTTAAGTATCACATGGTAGAATGTGATAAACACAAcgttcattttatattatgattaaaGGCTGTGTTGCAATGAAATTCCACGTATGTGGATAATAAGGACTCACAATCTTCTGTTTGAAATTGATGCTGTGAAGATCAAAATCTTATACAAAATTCTCATtgtcaaattaaagaaaaagtgaTGCGTTGTAAAGATGCTGGTATttcataacaaaatgtaatgactGCACTGTACACAACAgctaattgtatataatttcgTATTTGTCAAGGAAATGGAAGATCCAATCCAATCCAGTAATTGTTTAAGGAAATGTTGTTTtctagttgttttttgtttttttatgattccCCCCATTGTGGGGATTCAATTCTCTCTCAGGtttaaagtacattataaaaaaaacacaatgaaagatGTATTCAGAGCACTAGTACTTATCATTTAAACCTTCATATATGATTCTCATTTATctcataataaatattatattgggtgcttttaaatatgtgtatatatatatatatatatatatatacaataattgccattatttaaaat

Function

GO: NA

KEGG:

id description
K10270 FBXL4; F-box and leucine-rich repeat protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004013 True 3316 mRNA 0.43 8 29663803 29681594

Neighbor

gene id symbol gene type direction distance location
AMCG00004012 NA coding upstream 37285 29613189 ~ 29626518 (+)
AMCG00004015 NA coding upstream 52273 29600561 ~ 29611530 (+)
AMCG00004017 NA coding upstream 65576 29591603 ~ 29598227 (+)
AMCG00004014 NA coding upstream 76652 29581102 ~ 29587151 (+)
AMCG00004016 NA coding upstream 99239 29561349 ~ 29564564 (+)
AMCG00004023 NA coding downstream 302019 29983613 ~ 29998684 (+)
AMCG00004027 NA coding downstream 412708 30094302 ~ 30097720 (+)
AMCG00004024 rwdd1,LOC107587776,LOC107704860,LOC106579327 coding downstream 429492 30111086 ~ 30114969 (+)
AMCG00004026 NA coding downstream 449642 30131236 ~ 30137944 (+)
AMCG00004025 NA coding downstream 475768 30157362 ~ 30167872 (+)
G5085 NA non-coding upstream 302124 29354521 ~ 29361679 (+)
G5005 NA non-coding upstream 710738 28952553 ~ 28953065 (+)
G4981 NA non-coding upstream 770772 28892684 ~ 28893031 (+)
G4917 NA non-coding upstream 1194859 28466917 ~ 28468944 (+)
G4837 NA non-coding upstream 1558096 28104210 ~ 28105707 (+)
G5129 NA non-coding downstream 2633 29684227 ~ 29685543 (+)
G5141 pou3f2,LOC106584047,LOC106605033 non-coding downstream 16073 29697667 ~ 29699224 (+)
G5185 NA non-coding downstream 427247 30108841 ~ 30109040 (+)
G5191 NA non-coding downstream 440501 30122095 ~ 30123181 (+)
G5198 NA non-coding downstream 464261 30145855 ~ 30146557 (+)
AMCG00004011 ccnc other upstream 122445 29527414 ~ 29541358 (+)
AMCG00003993 NA other upstream 979822 28640174 ~ 28683981 (+)
AMCG00003991 NA other upstream 1078129 28568184 ~ 28585674 (+)
AMCG00003990 NA other upstream 1198157 28454419 ~ 28465646 (+)
AMCG00003988 NA other upstream 1264062 28379811 ~ 28399741 (+)
G5245 NA other downstream 589616 30271210 ~ 30271524 (+)
AMCG00004039 NA other downstream 615273 30296867 ~ 30307175 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other downstream 1206401 30887995 ~ 30894827 (+)
AMCG00004079 NA other downstream 2718811 32400405 ~ 32402383 (+)
G5642 NA other downstream 3448526 33130120 ~ 33131186 (+)

Expression


Co-expression Network