AMCG00004059


Basic Information

Item Value
gene id AMCG00004059
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 30897076 ~ 30913151 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004059
GCACAGccagcagagacagagacagagacagagacagagacacagacacagacacagtcacagtcTCAGTGTAAGCAGGAGCAAGTCGGTGTCCCCTGAGCTTCGCTTCTCCGCCGCCTGACAGCTCTGCCCGCTTGTGCAGGTCCACTGCGGAGTGAAGCCGGAGTCGTTGGTTTGTTTCCTGGGTCGCTCTCCGCGTTTGTAGATGTGAATTCATGTCGGCGCATTATCCTTCACTATACTGCTCCGTGTTCCTGCCCTCCTGTGAGATGACTGAGGTGGTGATGATGAGCGGCGCCCCCATGGACGACATCCATCTCATTCCTGGCAAAGACCGACACTCCTATCAGATTTTCCCCGACCCCTCGGACTTTGAGCGCTGCTGTAAGCTGAAGGACCGGCTGCCCTCCATCGTGGTGGAGCCGTcggagggagaggtggagagtGGGGAGCTGCGCTGGCCTCCAGAGGAGTTCCTGggcactggactggactctaATGTGGCCCACCGGCCCAAGGTGGCTAAGTGTTGTCTTGAAAGGAATGTGCTGGCGGCCCTGCAGAGCTCAGCAGTCCTGGGCAATGATGACAGTAATTACAGATATGGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004059 True 611 mRNA 0.58 5 30897076 30913151

Neighbor

gene id symbol gene type direction distance location
AMCG00004051 bpnt1 coding upstream 48040 30842720 ~ 30849036 (+)
AMCG00004049 NA coding upstream 89843 30805091 ~ 30807233 (+)
AMCG00004050 NA coding upstream 94867 30782054 ~ 30802209 (+)
AMCG00004045 NA coding upstream 174749 30705140 ~ 30722327 (+)
AMCG00004028 cmtr1,LOC107682822 coding upstream 626878 30258472 ~ 30270198 (+)
AMCG00004058 NA coding downstream 11637 30924788 ~ 30928491 (+)
AMCG00004064 NA coding downstream 32321 30945472 ~ 30947477 (+)
AMCG00004057 NA coding downstream 48482 30961633 ~ 30969204 (+)
AMCG00004065 NA coding downstream 61825 30974976 ~ 30990100 (+)
AMCG00004067 NA coding downstream 117267 31030418 ~ 31039737 (+)
G5297 NA non-coding upstream 118806 30778047 ~ 30778270 (+)
G5291 NA non-coding upstream 156203 30740564 ~ 30740873 (+)
G5272 NA non-coding upstream 343862 30552977 ~ 30553214 (+)
G5271 NA non-coding upstream 351551 30545287 ~ 30545525 (+)
G5248 NA non-coding upstream 620794 30275108 ~ 30276282 (+)
G5417 NA non-coding downstream 79455 30992606 ~ 30992900 (+)
G5482 NA non-coding downstream 873183 31786334 ~ 31786883 (+)
G5490 NA non-coding downstream 1115853 32029004 ~ 32029301 (+)
G5493 NA non-coding downstream 1278169 32191320 ~ 32191542 (+)
G5499 NA non-coding downstream 1355597 32268748 ~ 32269071 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other upstream 2249 30887995 ~ 30894827 (+)
AMCG00004039 NA other upstream 589901 30296867 ~ 30307175 (+)
G5245 NA other upstream 625552 30271210 ~ 30271524 (+)
AMCG00004011 ccnc other upstream 1355718 29527414 ~ 29541358 (+)
AMCG00003993 NA other upstream 2213095 28640174 ~ 28683981 (+)
AMCG00004079 NA other downstream 1487254 32400405 ~ 32402383 (+)
G5642 NA other downstream 2216969 33130120 ~ 33131186 (+)
AMCG00004138 fkbp1b other downstream 3939712 34852863 ~ 34870320 (+)
AMCG00004158 NA other downstream 4839299 35752450 ~ 35766180 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other downstream 5114128 36027279 ~ 36045282 (+)

Expression


Co-expression Network