AMCG00004085


Basic Information

Item Value
gene id AMCG00004085
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 32598453 ~ 32600592 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004085
ATGAGACTGGCTCGAAGCCGTCTGACTTTCCACATGTCTGAGAAACGCTGTGATGCCAAGGGTGTAAATGGGAACCTCTTGTGTGTTCTTATTAGCTGTGGAAGAGGCAGCCAAACTAGAAAAGGCTTTGGTCCTGTTTCAGGGGCTGGCAGGATAGGCTTCAGATCAGCTGGCGCTTTGTCTGGGGTAGGGGTGCAAAAGAGCAGGGTGGCGTCCCCAGGGTTCGCATCAGTGGACTTGACTCTAAAGGCACAGAGAAAGTGTCTGGCCAGATGTTGGCTGTGGGGTCCTGTCCTGCAGCAGCTTCCTGTCCAAGAGGAGCAGTGTGGGTTTGGGACAGAGCCGTGGGTGGTGCGCACAGCACTGTGCACCAGGAACAGGGTTTTTGGTGGTGGCAATAAACGACTTACAGgaCAGGAGATCCAAAGGCCCTGGCTGCTGCAGAAATACCCTGGCTCTAGTCTCCAAGGCACTGAGGAGACGTTGCCAACCTGTTTCGCACGCCATCAGACTGCTGCCCTTCAACTGCGTCTGAACCCCAACTTCCACTACATTGTCCCCACAGTGCACGCCACACTGACCTCCCAGAGACTGTTCCACTCCTGTGTATTTTGGAACCGTGAGGTTGAGAAAGACACACAGTGCCTTGAAAGCAGTATCTCCTCTATGTCTACACAATTGCTAGGCTATGACCGTCCTGAACCTGCCCACGCCCGTGGGGCCCAGGAACTGTCACGTTTGCCAGATGACAGAGCTCACTTGAGCTCAGAACCCTGCGACCAGGACATAAATCTTAGTAAAACCCATGGTATTAAACTCAGTGAAGGTGACAGACTGACAGCAGGGGTCCACAGAGGCTCCTGCCTGAAAACTGACAAAGCCAAGTcagacacacgcacaaacaGACTGAGCCTGAGAGCTCACCTCAGGAAGGATGAAGGCCCTTTCTGTGTTGAAGAAACCAGCACTGACTTCACTGAGAATCCCAGTAAGATGGGAGAGGGTGGCTGTTTTTATCTTGCAAGGGCGGGAAGACAAGATCCTGGCCGCCCCTTTCCCCTCAAAGCACTTAGAAATGCCAAAGATGGTGTtctgcagtattgctacagtagTATTATAAATGCGATTCATGGATGGACTTGCAAGGACAAAACCAGCTCCCGCACAACACAAGTCAAACCCAAGCTGGCTACTAACACCTTGGGAAGAAGGTACCTGACGACGTCGGGGAGCTATGAAGCCTCTGACCAGCTGACCCACACCGATGCCCAGGGCCGGGCCTCCATGGTGGATGTGGGTGGGAAGCCCCTCAGTCGGCGCACTGCTATAGCCAGTGCCACAGTGTGCCTAGGCGAAAAGGCATTCCGACTGGTGAAGGAGAACCAGCTGGCCAAGGGGGATGCCCTGAGTGTGGCGCAGATTGCAGGGATCATGGCTGCCAAGCAGACTAGCTCCCTGATCCCACTGTGCCACCCGCTGCCACTGGACCGCGTGTCTGTCTCCCTGGAGCTGGTGGAGCCTGGGTGGTGCGCTGTTATCACGGCAACGTGCCTCACTACAGGCCGCACCGGGGTGGAGATGGAGGCCCTGACTGCTGCCTCCATCGCCGCCCTCGCCCTCTATGACATGTGCAAAGCTGTCACGCACGACATCACAATCCAGGACATCAGATTGCTCAGCAAGACAGGGGGTCAAAGGGGAGACTTCCACCGCCCCACCCCTGGCACTTACATGCCTCCTGTTACAGGGACGCCAGACAAGGGAGAAAGAGGGAATGAGATAGAACCCTAG

Function

GO: NA

KEGG:

id description
K03637 moaC, CNX3; cyclic pyranopterin monophosphate synthase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004085 True 1791 mRNA 0.55 2 32598453 32600592

Neighbor

gene id symbol gene type direction distance location
AMCG00004084 mocs1 coding upstream 2052 32583540 ~ 32596401 (+)
AMCG00004086 NA coding upstream 15754 32571579 ~ 32582699 (+)
AMCG00004082 NA coding upstream 39088 32558979 ~ 32559365 (+)
AMCG00004081 bre coding upstream 68614 32499473 ~ 32529839 (+)
AMCG00004083 bre,LOC104968080 coding upstream 142607 32449407 ~ 32455846 (+)
AMCG00004087 kif6 coding downstream 128068 32728660 ~ 32774812 (+)
AMCG00004089 NA coding downstream 214151 32814743 ~ 32836681 (+)
AMCG00004088 NA coding downstream 238372 32838964 ~ 32844650 (+)
AMCG00004093 NA coding downstream 276218 32876810 ~ 32900670 (+)
AMCG00004092 gnmt,LOC107748599,LOC107566124 coding downstream 336813 32937405 ~ 32946916 (+)
G5529 NA non-coding upstream 210918 32384435 ~ 32387535 (+)
G5527 NA non-coding upstream 214774 32383409 ~ 32383679 (+)
G5522 NA non-coding upstream 248350 32348390 ~ 32350103 (+)
G5501 NA non-coding upstream 288541 32309505 ~ 32309912 (+)
G5499 NA non-coding upstream 329382 32268748 ~ 32269071 (+)
G5569 NA non-coding downstream 11241 32611833 ~ 32612051 (+)
G5662 NA non-coding downstream 837736 33438328 ~ 33445420 (+)
G5680 NA non-coding downstream 872444 33473036 ~ 33473330 (+)
G5681 NA non-coding downstream 874250 33474842 ~ 33475047 (+)
G5688 NA non-coding downstream 965581 33566173 ~ 33567479 (+)
AMCG00004079 NA other upstream 196070 32400405 ~ 32402383 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other upstream 1703626 30887995 ~ 30894827 (+)
AMCG00004039 NA other upstream 2291278 30296867 ~ 30307175 (+)
G5245 NA other upstream 2326929 30271210 ~ 30271524 (+)
AMCG00004011 ccnc other upstream 3057095 29527414 ~ 29541358 (+)
G5642 NA other downstream 529528 33130120 ~ 33131186 (+)
AMCG00004138 fkbp1b other downstream 2252271 34852863 ~ 34870320 (+)
AMCG00004158 NA other downstream 3151858 35752450 ~ 35766180 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other downstream 3426687 36027279 ~ 36045282 (+)
AMCG00004167 NA other downstream 3661196 36261788 ~ 36278234 (+)

Expression


Co-expression Network