AMCG00004126 (klhl29,LOC107742703)


Basic Information

Item Value
gene id AMCG00004126
gene name klhl29,LOC107742703
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 34695403 ~ 34724610 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004126
ATGGCTATATATGCCATTAAGAGTGTGGCGGAGGTGATTGTGCTGGTTGGGGGTCGTCAGGTAATCGGGATGAATCAGCGCGCCCTGACGGCCGTCACCTGCTTCAATCCCCAGAATAACAAGTGGTACcccctggccagcctgcctttCTACGATCGAGAGTTCTTCAGTGTCATTTCAGCGGGGGACAATATCTATCTGTCAGGTGGCATGGAGTCTGGAGTCACTCTGTCAGATGTCTGGTGCTACATGTCCCTTCTCGATAATTGGAACCTTGTGTCGCGAATGACGGTTCCCAGGTGTCGACATAATAGCCTGGTGTATGATGGGAAGCTGTATACCATTGGAGGACTGGGTGTAGCTGGGAATCTGGATCACGTTGAAAGATATGATACTATCACTAACCTGTGGGAGACGGTGTCGCCGCTGCCCAAGCCCGTGCACTCAGCAGCTGCCACAGTGTGTGGAGGAAAGATCTATGTGTTCGGAGGAGTGAACGAGGCTGGGAGATCGGCGGGAGTCTTGCAGTCTTACCTCCCTCAGACCAACACCTGGAGTTTCATTGAGTCTCCTATGATAGATAACAAGTACGCTCCTGCCGTCACCCTGAACGGATACATCTTCATCCTTGGAGGAGCTTATGCCAGAGCCACCACCATCTACGATCCAGACAAAGGAAATATCAAAGCGGGCCCTAACATGAATCACTCCAGGCAGTTCTGTAGCGCTGTGATTCTGGATGGCAAGATTTACGCCACGGGGGGAATCGTGAGCAGTGAAGGCCCCGCGCTGGGAAATATGGAGACCTTTGACCCCTGTACCAACATCTGGACACTCACCAAGGCTCCAGACGACTCGGCCCTGAAGTAA

Function

symbol description
klhl29 Orthologous to human KLHL29 (kelch like family member 29).

NR:

description
PREDICTED: kelch-like protein 29

GO: NA

KEGG:

id description
K10465 KLHL29, KBTBD9; kelch-like protein 29

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004126 True 870 mRNA 0.53 7 34695403 34724610

Neighbor

gene id symbol gene type direction distance location
AMCG00004124 klhl29,LOC107738561,LOC107678777 coding upstream 9613 34666392 ~ 34685790 (+)
AMCG00004125 NA coding upstream 56734 34631221 ~ 34638669 (+)
AMCG00004122 NA coding upstream 561791 34131126 ~ 34133612 (+)
AMCG00004121 NA coding upstream 565380 34119571 ~ 34130023 (+)
AMCG00004115 NA coding upstream 782518 33905291 ~ 33912885 (+)
AMCG00004127 NA coding downstream 73779 34798389 ~ 34808422 (+)
AMCG00004128 NA coding downstream 95558 34820168 ~ 34834115 (+)
AMCG00004137 cdc5l,LOC107594083,LOC106599718 coding downstream 239856 34964466 ~ 34977633 (+)
AMCG00004139 NA coding downstream 447866 35172476 ~ 35173032 (+)
AMCG00004140 runx2,LOC107378134,LOC102312376 coding downstream 482921 35207531 ~ 35210874 (+)
G5808 NA non-coding upstream 313304 34381868 ~ 34382099 (+)
G5804 NA non-coding upstream 402902 34292271 ~ 34292501 (+)
G5788 NA non-coding upstream 605281 34081826 ~ 34090122 (+)
G5787 NA non-coding upstream 614618 34078351 ~ 34080785 (+)
G5768 NA non-coding upstream 802260 33892474 ~ 33893143 (+)
G5867 NA non-coding downstream 169492 34894102 ~ 34895661 (+)
G5875 NA non-coding downstream 175026 34899636 ~ 35350027 (+)
G5914 NA non-coding downstream 576493 35301103 ~ 35306949 (+)
G6002 NA non-coding downstream 731066 35455676 ~ 35455887 (+)
G6007 NA non-coding downstream 741252 35465862 ~ 35466655 (+)
G5642 NA other upstream 1564217 33130120 ~ 33131186 (+)
AMCG00004079 NA other upstream 2293020 32400405 ~ 32402383 (+)
AMCG00004056 ypel5,LOC107568027,LOC103458748,LOC102788175,LOC102210471 other upstream 3800576 30887995 ~ 30894827 (+)
AMCG00004039 NA other upstream 4388228 30296867 ~ 30307175 (+)
G5245 NA other upstream 4423879 30271210 ~ 30271524 (+)
AMCG00004138 fkbp1b other downstream 128253 34852863 ~ 34870320 (+)
AMCG00004158 NA other downstream 1027840 35752450 ~ 35766180 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other downstream 1302669 36027279 ~ 36045282 (+)
AMCG00004167 NA other downstream 1537178 36261788 ~ 36278234 (+)
AMCG00004179 ptrhd1,LOC103399259 other downstream 1963020 36687630 ~ 36697885 (+)

Expression


Co-expression Network