AMCG00004174


Basic Information

Item Value
gene id AMCG00004174
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36501826 ~ 36502116 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004174
ATGATCTTAAGTGCCTCAGTCACCATTTCATACTCTGGAGAATATGGCACCAGCTCCTCTAAAGAGAAAACCATCTCCATGGCAGAGGAGACTACCATCACCATTCCTCCCAAAACCAAGATCACAGTGAAGCTGATGGTCAACAAGGATGATCATGCTGAGATTCCCTTCACAGCTACAATCAAGAAGACCAAGGCCAGTGGAGAGGTTGAGATGCTCACTGAGAAAGGCACCTGGAAGGGCGTGGCTTACGAAAATGTAGGGCTTGAAATCAGGGAAGCCGAAATATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004174 True 291 mRNA 0.47 1 36501826 36502116

Neighbor

gene id symbol gene type direction distance location
AMCG00004173 msra,LOC106571446 coding upstream 32802 36454991 ~ 36469024 (+)
AMCG00004170 ift172,LOC105901225,LOC107716708 coding upstream 111314 36348573 ~ 36390512 (+)
AMCG00004166 NA coding upstream 248928 36237806 ~ 36252898 (+)
AMCG00004164 si:ch211-243j20.2,LOC108429346,LOC107676254,LOC108279217,LOC107602209,LOC103363074 coding upstream 289878 36187493 ~ 36211948 (+)
AMCG00004165 NA coding upstream 343277 36134006 ~ 36158549 (+)
AMCG00004176 slc25a27,LOC107553473 coding downstream 161686 36663802 ~ 36669648 (+)
AMCG00004180 NA coding downstream 240511 36742627 ~ 36746065 (+)
AMCG00004186 slc5a6,LOC107601523,LOC107690043,LOC103362495 coding downstream 246740 36748856 ~ 36765206 (+)
AMCG00004187 enah,LOC107553420,LOC102788251 coding downstream 288318 36790434 ~ 36873869 (+)
AMCG00004192 NA coding downstream 382242 36884358 ~ 36904094 (+)
G6102 NA non-coding upstream 335956 36161606 ~ 36165870 (+)
G6067 NA non-coding upstream 681343 35820255 ~ 35820483 (+)
G6007 NA non-coding upstream 1035171 35465862 ~ 35466655 (+)
G6002 NA non-coding upstream 1045939 35455676 ~ 35455887 (+)
G5914 NA non-coding upstream 1194877 35301103 ~ 35306949 (+)
G6225 NA non-coding downstream 24552 36526668 ~ 36539067 (+)
G6240 NA non-coding downstream 51788 36553904 ~ 36555108 (+)
G6242 NA non-coding downstream 53990 36556106 ~ 36557331 (+)
G6247 NA non-coding downstream 63454 36565570 ~ 36593153 (+)
G6252 NA non-coding downstream 137544 36639660 ~ 36643702 (+)
AMCG00004167 NA other upstream 223592 36261788 ~ 36278234 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other upstream 456544 36027279 ~ 36045282 (+)
AMCG00004158 NA other upstream 735646 35752450 ~ 35766180 (+)
AMCG00004138 fkbp1b other upstream 1631506 34852863 ~ 34870320 (+)
G5642 NA other upstream 3370640 33130120 ~ 33131186 (+)
AMCG00004179 ptrhd1,LOC103399259 other downstream 185514 36687630 ~ 36697885 (+)
G6314 NA other downstream 271885 36774001 ~ 36774523 (+)
G6328 NA other downstream 359431 36861547 ~ 36891746 (+)
G6369 NA other downstream 497241 36999357 ~ 37000158 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other downstream 1330507 37832623 ~ 37847720 (+)

Expression


Co-expression Network