AMCG00004192


Basic Information

Item Value
gene id AMCG00004192
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 36884358 ~ 36904094 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00004192
atggagagagagaggatggagCGGGAGAGGTTGGAGAGAGAACGCCTGGAGCGGGAgagactggagagagagaggttggaACGAGAgaggctggagagagagaggttggaGCGAGAGCGTGCAGAGAGGGAGCGTGCGGAGCGAGAGCGGCTGGAGAGGGAACGACTGGAGCAGGAGCAGCTGGAGATAGAGCGGCTGGAGAGGGAACGGCTGGAGAGAGAGCGGCTGGAGAAAGAGCATCAGGAGCAGCTCGACAGGGAGCAGATggactgggagagagagcgCCGCATGTCGAATGCTGCATTTGAGTGCACCCTCTACACCACCCCGCCCCCCGACTATTCCAGCTGCCAGCCTCCTGCCGCCCCCCCGCCTTCCTACATCAAAGCAGTGTCCTCCCCCATGTCGTCCTCCCACccctccacctccaccaccactccccccaccccgcccTTGCGCCACTCCGCCTCCCGTTTTGCCACCTCGCTGGGCTCTGCCTTCCACCCTCCTGCTGTTCTCCCTTCTCCTTCCGCAGCTTCCCCTGCCTCCGCTGAACACTCTGTAAACTCTGTGCTGGGAGAGTCCAGCCCCTGTGCTCCAGAGCCGGCGGCCTCTCTGCTCACTGATCCTCACACCCAGCCGGgaccccctcctcctcccggtcctccccctcccccacccccacccggACAGGCCCCTCCGCCCACCCCTCCGCCCGCCCCTCCCCTCCCACCTGGTGGATTCTCCCAGGCCTTGGAGGAGAACCGCCCCCTGGCTGGCCTGGCCGCCGCCCTTGCTGGAGCCAAACTACGGAAAGTGCCAAGGAGCGAAGAGGCATCGAGTGCTGCCCCCGTCGCTGTGGGCTCTCCCGCCGCAGCCGCCAAGGCCGAAACTTCCCGTGGCAATGGGCCCCTCTCTGTGGGAGGGGGAGGACTGATGGAAGAGATGAGCGCCCTGCTGGCCAGGAGGAGAAGAATCGCTGAAAGGGGATCAACGCCTGAACCTGAGCAGAAGGATGAAACCGAGCCATCCACTCCAAAAGTCTCTGCGTCAGGAACACCAGATATGGCCAGAAAACCTTGGGAACGCAGTAACACAATGAATGGTAGCAAATCGCCTGTTATTTCAAGACCCAAGTCCACACCTGCGCCAGCTGGGTCCCTGAGTGCCAATGGGGTGCCAACAGAAGGTCTCGACTACGACAGATTGAAACAGGTTGGTCAGCTCTCTTCAGAGACTGAAGTCACAGTGCTGAAGCTCAGAGCGGAAATTGGCAAAAGGCGGAGAGGAGTGCAGACGAGCAGTGAGACAGGAAGACTGACACTGTTGCGGCAGCCCATCACAACCCCAGAGCAGCAGCAGACCCGGAGGAGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00004192 True 1377 mRNA 0.62 11 36884358 36904094

Neighbor

gene id symbol gene type direction distance location
AMCG00004187 enah,LOC107553420,LOC102788251 coding upstream 10489 36790434 ~ 36873869 (+)
AMCG00004186 slc5a6,LOC107601523,LOC107690043,LOC103362495 coding upstream 119152 36748856 ~ 36765206 (+)
AMCG00004180 NA coding upstream 138293 36742627 ~ 36746065 (+)
AMCG00004176 slc25a27,LOC107553473 coding upstream 214710 36663802 ~ 36669648 (+)
AMCG00004174 NA coding upstream 382242 36501826 ~ 36502116 (+)
AMCG00004191 NA coding downstream 8552 36912646 ~ 36918990 (+)
AMCG00004190 NA coding downstream 32810 36936904 ~ 36939547 (+)
AMCG00004193 LOC104951820 coding downstream 294829 37198923 ~ 37231208 (+)
AMCG00004197 LOC107698324,LOC104954172 coding downstream 490008 37394102 ~ 37417947 (+)
AMCG00004199 NA coding downstream 523355 37427449 ~ 37445287 (+)
G6321 NA non-coding upstream 102128 36782012 ~ 36782230 (+)
G6320 NA non-coding upstream 102941 36780561 ~ 36781417 (+)
G6319 NA non-coding upstream 105208 36778880 ~ 36779150 (+)
G6318 NA non-coding upstream 105781 36778368 ~ 36778577 (+)
G6317 NA non-coding upstream 106193 36777934 ~ 36778165 (+)
G6383 NA non-coding downstream 123945 37028039 ~ 37028246 (+)
G6405 NA non-coding downstream 254082 37158176 ~ 37265504 (+)
G6421 NA non-coding downstream 411551 37315645 ~ 37318146 (+)
G6427 NA non-coding downstream 433432 37337526 ~ 37341014 (+)
G6428 NA non-coding downstream 439967 37344061 ~ 37344445 (+)
G6314 NA other upstream 109835 36774001 ~ 36774523 (+)
AMCG00004179 ptrhd1,LOC103399259 other upstream 186473 36687630 ~ 36697885 (+)
AMCG00004167 NA other upstream 606124 36261788 ~ 36278234 (+)
AMCG00004160 LOC106571404,LOC106607809,LOC105897019 other upstream 839076 36027279 ~ 36045282 (+)
AMCG00004158 NA other upstream 1118178 35752450 ~ 35766180 (+)
G6369 NA other downstream 95263 36999357 ~ 37000158 (+)
AMCG00004210 fam49a,znf395,LOC108440968,LOC106571599,LOC107696187,LOC107553485,LOC106608122 other downstream 928529 37832623 ~ 37847720 (+)
AMCG00004257 dusp10,LOC106607590 other downstream 3422316 40326410 ~ 40341235 (+)
G7094 NA other downstream 4555482 41459576 ~ 41507231 (+)
AMCG00004304 NA other downstream 5306336 42210430 ~ 42216362 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location