Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00004490 |
| gene name | rexo2 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 51509455 ~ 51513615 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| rexo2 | Enables 3'-5' exonuclease activity. Acts upstream of or within nucleobase-containing compound metabolic process. Located in focal adhesion; mitochondrion; and nucleolus. |
| description |
|---|
| PREDICTED: oligoribonuclease, mitochondrial |
| id | name | namespace |
|---|---|---|
| GO:0090305 | nucleic acid phosphodiester bond hydrolysis | biological_process |
| GO:0004527 | exonuclease activity | molecular_function |
| GO:0003676 | nucleic acid binding | molecular_function |
| id | description |
|---|---|
| K13288 | orn, REX2, REXO2; oligoribonuclease |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00004490 | True | 1159 | mRNA | 0.52 | 7 | 51509455 | 51513615 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00004488 | LOC106612967,LOC106581099 | coding | upstream | 118566 | 51361740 ~ 51390889 (+) |
| AMCG00004489 | LOC108434141,LOC103024239 | coding | upstream | 183410 | 51319857 ~ 51326045 (+) |
| AMCG00004486 | ets1,LOC106612966 | coding | upstream | 560929 | 50938013 ~ 50948526 (+) |
| AMCG00004485 | NA | coding | upstream | 659260 | 50849074 ~ 50850195 (+) |
| AMCG00004482 | LOC106612963 | coding | upstream | 716900 | 50788031 ~ 50792555 (+) |
| AMCG00004494 | NA | coding | downstream | 179488 | 51693103 ~ 51723186 (+) |
| AMCG00004496 | NA | coding | downstream | 279248 | 51792863 ~ 51800719 (+) |
| AMCG00004495 | NA | coding | downstream | 337069 | 51850684 ~ 51852204 (+) |
| AMCG00004500 | NA | coding | downstream | 406359 | 51919974 ~ 51925476 (+) |
| AMCG00004498 | NA | coding | downstream | 417734 | 51931349 ~ 51937400 (+) |
| G8605 | NA | non-coding | upstream | 394603 | 51114580 ~ 51114852 (+) |
| G8596 | NA | non-coding | upstream | 538153 | 50970956 ~ 50971302 (+) |
| G8538 | NA | non-coding | upstream | 750095 | 50759075 ~ 50759360 (+) |
| G8509 | NA | non-coding | upstream | 813888 | 50695224 ~ 50695567 (+) |
| G8443 | NA | non-coding | upstream | 1221384 | 50284425 ~ 50288071 (+) |
| G8658 | NA | non-coding | downstream | 132234 | 51645849 ~ 51663424 (+) |
| G8764 | NA | non-coding | downstream | 577270 | 52090885 ~ 52091291 (+) |
| G8775 | NA | non-coding | downstream | 654701 | 52168316 ~ 52168540 (+) |
| G8808 | NA | non-coding | downstream | 754985 | 52268600 ~ 52268807 (+) |
| G8811 | NA | non-coding | downstream | 855478 | 52369093 ~ 52369476 (+) |
| G8606 | NA | other | upstream | 394193 | 51114941 ~ 51115262 (+) |
| AMCG00004477 | NA | other | upstream | 756023 | 50741388 ~ 50753432 (+) |
| AMCG00004463 | NA | other | upstream | 1266412 | 50236677 ~ 50243043 (+) |
| G8377 | NA | other | upstream | 1351736 | 50151264 ~ 50157719 (+) |
| AMCG00004449 | NA | other | upstream | 1557922 | 49938552 ~ 49951533 (+) |
| AMCG00004501 | NA | other | downstream | 425934 | 51939549 ~ 51946818 (+) |
| AMCG00004509 | NA | other | downstream | 475738 | 51989353 ~ 52013630 (+) |
| G9012 | NA | other | downstream | 1669779 | 53183394 ~ 53183983 (+) |
| AMCG00004546 | dixdc1,LOC107715327,LOC107693513 | other | downstream | 1745564 | 53259179 ~ 53270254 (+) |
| G9118 | NA | other | downstream | 2090146 | 53603761 ~ 53607898 (+) |
