G8380 (cbl,LOC102793573)


Basic Information

Item Value
gene id G8380
gene name cbl,LOC102793573
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 50171520 ~ 50171951 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU10343
attcaaaaatatttttggttCAGACAAACCAAAATCCTGAGCATTGCAAATCGTAACCATAATCCTACTCCCTAAAATACAGCGCACACATTCTGCATGGGCCGTCAATATTGGGATGGGATGCTCCAGATAGCAGAGTGTTAAAGTGGAGAGACTTCTGCCAAGGAAGCATGGGCGGTTCGTTACCTGGGCTGCGAGTTCTCCTCGTACATCCTCTCCTTGCCCTCCTTGAAGAGGCTGATGGTCTGCTTGGTCTTCTTGGTGAGATTCTCCATGAAGACGCGGAAATACTCGTTCTCACCCAGCGTCTCCATCTTGCCCTCGTAGCGCGACAGGATTGTGCGCAGGTGCTGGTAGGTGTCTGGGAGAAGGTCCAGGATGTAGGGGGGGCTGTTCTTCAGAGCCAGCTTGGGGTTCTGGCACAGCCGCACC

Function

symbol description
cbl Predicted to enable SH3 domain binding activity; receptor tyrosine kinase binding activity; and ubiquitin protein ligase activity. Acts upstream of or within definitive hemopoiesis. Predicted to be located in cytoplasm. Predicted to be active in membrane raft and plasma membrane. Used to study myeloproliferative neoplasm. Human ortholog(s) of this gene implicated in acute myeloid leukemia; juvenile myelomonocytic leukemia; lung non-small cell carcinoma; and myeloid neoplasm. Orthologous to human CBL (Cbl proto-oncogene).

NR:

description
PREDICTED: E3 ubiquitin-protein ligase CBL

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU10343 True 432 lncRNA 0.52 1 50171520 50171951

Neighbor

gene id symbol gene type direction distance location
AMCG00004458 NA coding upstream 35686 50121429 ~ 50135834 (+)
AMCG00004455 LOC107601691 coding upstream 139178 50004310 ~ 50032342 (+)
AMCG00004453 kmt2a coding upstream 181856 49989275 ~ 49989664 (+)
AMCG00004448 LOC108233819,LOC107098727 coding upstream 184029 49984727 ~ 49987491 (+)
AMCG00004450 ube4a coding upstream 188362 49968474 ~ 49983158 (+)
AMCG00004459 NA coding downstream 12751 50184702 ~ 50187493 (+)
AMCG00004462 slc37a4,LOC106612980,LOC107670393,LOC107593481 coding downstream 27554 50199505 ~ 50212190 (+)
AMCG00004464 rps25,LOC107758587,LOC107583381,LOC107679519,LOC107565279 coding downstream 40266 50212217 ~ 50214554 (+)
AMCG00004468 NA coding downstream 86880 50258831 ~ 50265447 (+)
AMCG00004469 tbrg1 coding downstream 100591 50272542 ~ 50281575 (+)
G8376 NA non-coding upstream 21978 50149325 ~ 50149542 (+)
G8375 cbl non-coding upstream 22399 50148884 ~ 50149121 (+)
G8374 NA non-coding upstream 23325 50147876 ~ 50148195 (+)
G8373 NA non-coding upstream 25697 50145371 ~ 50145823 (+)
G8372 cbl,LOC107601723 non-coding upstream 26530 50143305 ~ 50144990 (+)
G8443 NA non-coding downstream 112474 50284425 ~ 50288071 (+)
G8509 NA non-coding downstream 523273 50695224 ~ 50695567 (+)
G8538 NA non-coding downstream 587124 50759075 ~ 50759360 (+)
G8596 NA non-coding downstream 799005 50970956 ~ 50971302 (+)
G8605 NA non-coding downstream 942629 51114580 ~ 51114852 (+)
G8377 NA other upstream 13801 50151264 ~ 50157719 (+)
AMCG00004449 NA other upstream 219987 49938552 ~ 49951533 (+)
AMCG00004442 NA other upstream 357496 49806361 ~ 49814024 (+)
AMCG00004425 zbtb44,LOC106580932,LOC106612543,LOC102781915 other upstream 852685 49298736 ~ 49318835 (+)
AMCG00004424 NA other upstream 1111465 49043590 ~ 49060055 (+)
AMCG00004463 NA other downstream 64726 50236677 ~ 50243043 (+)
AMCG00004477 NA other downstream 569437 50741388 ~ 50753432 (+)
G8606 NA other downstream 942990 51114941 ~ 51115262 (+)
AMCG00004501 NA other downstream 1767598 51939549 ~ 51946818 (+)
AMCG00004509 NA other downstream 1817402 51989353 ~ 52013630 (+)

Expression


Co-expression Network