G9246


Basic Information

Item Value
gene id G9246
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 54207621 ~ 54207935 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU11447
cttaaaatcacttaaaaaaatttaaaatctttgtgattttaacaagaactaaaacaattaactttaaaataaacgtggGTGACTCACAGTAGCTCCGGTAGTTCCAGTTGCTGGGCAAGTACGCGTGCTGCACCGCCCCCTGCTGCTGGGACGAGGACGTCTGCAGGCCGTGGCTCTGAGCCAGCGCCACGGGGGTGACCGCCTGCAGCTGGGCGGGGCTGAGCTCCTGAGCCGCCTGGGAGGAGGGGCTGAGCGGCTGGCCCCCCACCTGCGGACCAATCAGGAACGAGAGCAGAGAGGGGGTGTTCAAAAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU11447 True 315 lncRNA 0.56 1 54207621 54207935

Neighbor

gene id symbol gene type direction distance location
AMCG00004578 NA coding upstream 106873 54077164 ~ 54100748 (+)
AMCG00004577 NA coding upstream 183465 54016361 ~ 54024156 (+)
AMCG00004576 NA coding upstream 195279 54011849 ~ 54012342 (+)
AMCG00004568 NA coding upstream 344404 53849628 ~ 53863217 (+)
AMCG00004566 NA coding upstream 359567 53826947 ~ 53848054 (+)
AMCG00004580 aplp2,LOC102785027 coding downstream 49633 54257568 ~ 54281403 (+)
AMCG00004586 NA coding downstream 86999 54294934 ~ 54302577 (+)
AMCG00004584 NA coding downstream 100313 54308248 ~ 54311938 (+)
AMCG00004587 NA coding downstream 169314 54377249 ~ 54381369 (+)
AMCG00004597 NA coding downstream 177656 54385591 ~ 54394043 (+)
G9245 NA non-coding upstream 261 54207151 ~ 54207360 (+)
G9244 NA non-coding upstream 650 54206018 ~ 54206971 (+)
G9243 NA non-coding upstream 2631 54204221 ~ 54204990 (+)
G9191 NA non-coding upstream 194592 54012826 ~ 54013029 (+)
G9170 NA non-coding upstream 225638 53933169 ~ 53981983 (+)
G9247 NA non-coding downstream 1781 54209716 ~ 54209918 (+)
G9248 NA non-coding downstream 2406 54210341 ~ 54210706 (+)
G9249 NA non-coding downstream 2974 54210909 ~ 54211423 (+)
G9250 NA non-coding downstream 4512 54212447 ~ 54212655 (+)
G9298 NA non-coding downstream 176291 54384226 ~ 54444517 (+)
G9197 NA other upstream 174314 54032031 ~ 54033307 (+)
G9129 NA other upstream 346093 53677564 ~ 53861528 (+)
G9128 NA other upstream 363762 53648011 ~ 53843859 (+)
G9132 NA other upstream 440511 53766543 ~ 53767110 (+)
AMCG00004563 NA other upstream 537099 53636039 ~ 53670522 (+)
AMCG00004585 nfrkb,LOC107567165,LOC107715331,LOC107693532 other downstream 106187 54314122 ~ 54327599 (+)
AMCG00004588 NA other downstream 138567 54346502 ~ 54354976 (+)
G9300 sidt2 other downstream 186856 54394791 ~ 54395300 (+)
AMCG00004595 NA other downstream 262083 54470018 ~ 54482791 (+)
AMCG00004604 NA other downstream 392683 54600618 ~ 54629219 (+)

Expression


Co-expression Network