Gene
RNA
| Item | Value |
|---|---|
| gene id | G3270 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 18545353 ~ 18545976 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU3984 | True | 624 | lncRNA | 0.42 | 1 | 18545353 | 18545976 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00003796 | marcks | coding | downstream | 107393 | 18435287 ~ 18437960 (-) |
| AMCG00003794 | hs3st5 | coding | downstream | 160601 | 18321860 ~ 18384752 (-) |
| AMCG00003792 | NA | coding | downstream | 258201 | 18280123 ~ 18287152 (-) |
| AMCG00003793 | NA | coding | downstream | 269896 | 18248055 ~ 18275457 (-) |
| AMCG00003791 | eva1a,LOC107593306,LOC107719434 | coding | downstream | 318431 | 18222745 ~ 18226922 (-) |
| AMCG00003801 | NA | coding | upstream | 137406 | 18683382 ~ 18690727 (-) |
| AMCG00003810 | NA | coding | upstream | 237672 | 18783648 ~ 18785327 (-) |
| AMCG00003806 | NA | coding | upstream | 333559 | 18879535 ~ 18889212 (-) |
| AMCG00003807 | NA | coding | upstream | 346788 | 18892764 ~ 18912514 (-) |
| AMCG00003811 | NA | coding | upstream | 385788 | 18931764 ~ 18937964 (-) |
| G3266 | NA | non-coding | downstream | 105843 | 18439101 ~ 18439510 (-) |
| G3257 | NA | non-coding | downstream | 127287 | 18409870 ~ 18418066 (-) |
| G3170 | odc1,LOC107687948,LOC107753348,LOC107758719,LOC107687839 | non-coding | downstream | 604641 | 17935840 ~ 17940712 (-) |
| G2972 | NA | non-coding | downstream | 1285810 | 17257937 ~ 17259543 (-) |
| G2973 | NA | non-coding | downstream | 1290588 | 17254271 ~ 17254765 (-) |
| G3354 | NA | non-coding | upstream | 329606 | 18875582 ~ 18878573 (-) |
| G3374 | NA | non-coding | upstream | 403796 | 18949772 ~ 18950252 (-) |
| G3395 | NA | non-coding | upstream | 499831 | 19045807 ~ 19046205 (-) |
| G3402 | NA | non-coding | upstream | 531480 | 19077456 ~ 19077864 (-) |
| G3403 | NA | non-coding | upstream | 533458 | 19079434 ~ 19079665 (-) |
| AMCG00003782 | ctsb | other | downstream | 392972 | 18146660 ~ 18152381 (-) |
| AMCG00003784 | NA | other | downstream | 402672 | 18135379 ~ 18142681 (-) |
| G3181 | NA | other | downstream | 600411 | 17942577 ~ 17944942 (-) |
| AMCG00003751 | NA | other | downstream | 1404971 | 17137248 ~ 17140382 (-) |
| AMCG00003742 | kif26ba,LOC107693166,LOC107682227,LOC107589674,LOC107586651,LOC107729288 | other | downstream | 1673878 | 16868332 ~ 16871475 (-) |
| AMCG00003825 | NA | other | upstream | 815842 | 19361818 ~ 19373225 (-) |
| G3517 | LOC101154678 | other | upstream | 878987 | 19424963 ~ 19425366 (-) |
| G3523 | NA | other | upstream | 898040 | 19444016 ~ 19506753 (-) |
| AMCG00003893 | NA | other | upstream | 4983543 | 23529519 ~ 23533882 (-) |
| AMCG00003896 | tmem181 | other | upstream | 5194609 | 23740585 ~ 23757796 (-) |
