G3884


Basic Information

Item Value
gene id G3884
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 22224718 ~ 22225101 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU4705
aagctaccttcagtcactcgtctctccatacatcccctccagaccactgcgctcctccagtgccagaaggctaactctgcctcctctccactctccctcctccagagtCGCTCCTTCGCATCCCtgacccctaagtggtggaacgacctgcccactgaagtcaaaacagcagagtccttgacctcattccggcgcttactcaagacgcatctcttccgacagcacttgtaatattagtcctctatccctgctagatagcacttcagcttattatgctcctcgcgttcttgattgttttcctccttgctccctttcccgtagccctcgtctgtgaccctacatcttgacagcacttagctttcaccgtccaggatgtaggacctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU4705 True 384 lncRNA 0.59 1 22224718 22225101

Neighbor

gene id symbol gene type direction distance location
AMCG00003861 NA coding upstream 117988 22101288 ~ 22106730 (+)
AMCG00003856 NA coding upstream 243128 21970496 ~ 21981590 (+)
AMCG00003855 NA coding upstream 265733 21950331 ~ 21958985 (+)
AMCG00003854 NA coding upstream 361919 21857490 ~ 21862799 (+)
AMCG00003847 NA coding upstream 688960 21491884 ~ 21535758 (+)
AMCG00003873 NA coding downstream 249986 22475087 ~ 22498055 (+)
AMCG00003871 NA coding downstream 288634 22513735 ~ 22523525 (+)
AMCG00003872 NA coding downstream 303258 22528359 ~ 22536293 (+)
AMCG00003876 NA coding downstream 598669 22823770 ~ 22829038 (+)
AMCG00003878 hbs1l,LOC107756395 coding downstream 619242 22844343 ~ 22859805 (+)
G3878 NA non-coding upstream 24040 22197314 ~ 22200678 (+)
G3871 NA non-coding upstream 39907 22183243 ~ 22184811 (+)
G3863 NA non-coding upstream 52613 22170340 ~ 22172105 (+)
G3845 NA non-coding upstream 147260 22076992 ~ 22077458 (+)
G3798 NA non-coding upstream 208266 21917276 ~ 22016452 (+)
G3886 NA non-coding downstream 10995 22236096 ~ 22240098 (+)
G3907 NA non-coding downstream 177503 22402604 ~ 22404854 (+)
G3914 NA non-coding downstream 275426 22500527 ~ 22500826 (+)
G3915 NA non-coding downstream 275816 22500917 ~ 22501829 (+)
G3991 NA non-coding downstream 643777 22868878 ~ 22869139 (+)
G3799 med23 other upstream 300931 21922636 ~ 21923787 (+)
AMCG00003853 NA other upstream 322853 21890523 ~ 21901865 (+)
G3771 NA other upstream 464088 21745850 ~ 21760630 (+)
G3751 NA other upstream 675185 21549201 ~ 21549533 (+)
AMCG00003828 ctgf,ctgfa,moxd1,LOC106571301,LOC107683930,LOC106571350 other upstream 2827032 19271965 ~ 19397686 (+)
AMCG00003874 NA other downstream 457915 22683016 ~ 22769227 (+)
AMCG00003884 NA other downstream 1107500 23332601 ~ 23338241 (+)
AMCG00003891 NA other downstream 1296725 23521826 ~ 23533875 (+)
AMCG00003898 LOC105418227,LOC108432361,LOC107549029,LOC107708771,LOC107571650,LOC107756347,LOC107656533 other downstream 1484928 23710029 ~ 23726144 (+)
AMCG00003902 NA other downstream 1613488 23838589 ~ 24042885 (+)

Expression


Co-expression Network